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View Structure Prediction Details

Protein: SPBC543.08
Organism: Schizosaccharomyces pombe
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC543.08.

Description E-value Query
Range
Subject
Range
CG10671-PA - This gene is referred to in FlyBase by the symbol Dmel\CG10671 (CG10671, FBgn0035586). It is a prote...
221.0 [0..16] [241..60]
gi|85091715 - gi|85091715|ref|XP_959037.1| hypothetical protein [Neurospora crassa OR74A]
gi|32414661, gi|... - gi|32414661|ref|XP_327810.1| hypothetical protein [Neurospora crassa], gi|28920434|gb|EAA29801.1| hy...
216.0 [0..21] [227..35]
CE38132 - status:Confirmed UniProt:Q5CZ37 protein_id:CAI58649.1
215.0 [0..16] [237..38]
gi|39578893, gi|... - gi|39578893|emb|CAE57068.1| Hypothetical protein CBG24962 [Caenorhabditis briggsae], gi|187039631|em...
214.0 [0..16] [237..38]
gi|46124473, gi|... - gi|46124473|ref|XP_386790.1| hypothetical protein FG06614.1 [Gibberella zeae PH-1], gi|42553165|gb|E...
213.0 [0..21] [231..38]
gi|39975179, gi|... - gi|39975179|ref|XP_368980.1| hypothetical protein MGG_00264 [Magnaporthe grisea 70-15], gb|EAA48606....
211.0 [0..21] [246..51]
gi|109091971 - gi|109091971|ref|XP_001082092.1| PREDICTED: hypothetical protein LOC128486 [Macaca mulatta]
207.0 [0..23] [237..21]
gi|76633614 - gi|76633614|ref|XP_596343.2| PREDICTED: similar to Uncharacterized protein C20orf142 [Bos taurus]
205.0 [0..25] [237..44]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKTASHYW NEETSILKLR RKDILLFEIY ATTLLLGSIY SIYVDKWSIT SYFGNSKNLI  60
   61 NLIFVKRGWF WTSLVYFYHA WDQKRNKIDF KFISRYIVAT LWWMFVTQWF IGPGLIDRTF 120
  121 ALSGGSCKNF DGD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSVFIPLTAS TCKGLNGSWS GGHDLSGHVF LLTHSSLFML SENFSFILNN GIKATSTKVL  60
   61 FGLLGLWWWM LFVTASFYHT TFEKCTGFFS GILEWSIVYV FSSRMPAVAD LLGSSDY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle