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View Structure Prediction Details

Protein: SPCC162.12
Organism: Schizosaccharomyces pombe
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC162.12.

Description E-value Query
Range
Subject
Range
gi|3218402 - gi|3218402|emb|CAA19592.1| SPCC162.12 [Schizosaccharomyces pombe]
621.0 [0..1] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERPSLSRRT SSSTVSTDGE GVYSRSTKER KRNFIVNSRL KRGGGHVRVN RSGRLGSVTM  60
   61 RPSALTRAHS QNPNSSLVNN SSAVSHLTKQ RSLNDLHELN GPKHVAKNGL IPLTQRKPNC 120
  121 VWDDAPVDND STAGNLDSDS ALP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [144-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSVTTNEAA DSSRASSPVT RVVAVHDNKK KIINSNISNA PPFNNTDVQA SARPPAAGQD  60
   61 DSAADASTTK SSPVHNEVMA EPLPHSNNRE VTQATNQPKW QIHSGSDIAS EPPTLSRGNS 120
  121 LSLLANRKVP STNVKKSQAE LYDLGSSTSR TQQKLLIQRA SSKFDIVEDD MDTNPSKRFS 180
  181 NPHTKHIMDL VRTQYRNVLR TRELIPEFLE KIRSSYSNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [363-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNFDSQNAFN TSAAGTAGTR EETISNGQNG IVASAETSKK DDGVQSASLN ASMSARSHAR  60
   61 QRSIHVPKTR KDTDYESIHQ KLLQLWSQG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle