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View Structure Prediction Details

Protein: SPAC25B8.02
Organism: Schizosaccharomyces pombe
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC25B8.02.

Description E-value Query
Range
Subject
Range
gi|254540202, gi... - gi|38148642|gb|AAH60603.1| Mapk8ip3 protein [Mus musculus], gi|254540202|ref|NP_001156921.1| mitogen...
236.0 [0..5] [257..68]
gi|62655847, gi|... - gi|62655847|ref|XP_220232.3| PREDICTED: similar to C-jun-amino-terminal kinase-interacting protein 3...
234.0 [0..5] [257..68]
gi|68405351 - gi|68405351|ref|XP_691350.1| PREDICTED: similar to breast cancer metastasis-suppressor 1-like [Danio...
213.0 [0..1] [188..57]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVLSRVFDN EKEELDPLLN NPLTASEFRA KKAELEAELE SIRNGTCKTL LDLADELRRS  60
   61 RDEELEIAER WRTFLVNRAQ EEYEVEMKAA KEEYEYRCKT LKEMVLSHLN EKKRKIYEAK 120
  121 DMFDIGSESS TLLLHDASSQ FIDRRKLRHR RNAGNQQNTQ QLPSLNFFDD YLLFPTDETA 180
  181 VIPQSVKNAV RNSVNSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [198-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPTSAEASLF SPLLSMANAN PTNGRERDPR ASERAERDRE KAVEKGLSGA TEEDIQSDLQ  60
   61 LLKKELAKKK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle