YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC23G3.04
Organism:	Schizosaccharomyces pombe
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC23G3.04.

Description	E-value	Query Range	Subject Range
gi\|39974199, gi\|... - gi\|39974199\|ref\|XP_368490.1\| hypothetical protein MGG_00754 [Magnaporthe grisea 70-15], gb\|EAA49096....	193.0	[0..31]	[189..94]
gi\|28922360, gi\|... - gi\|32412846\|ref\|XP_326903.1\| hypothetical protein [Neurospora crassa], gi\|28950001\|emb\|CAD70886.1\| c... gi\|85099703 - gi\|85099703\|ref\|XP_960833.1\| hypothetical protein NCU01410 [Neurospora crassa OR74A]	169.0	[0..30]	[185..96]
gi\|42545487, gi\|... - gi\|46137177\|ref\|XP_390280.1\| hypothetical protein FG10104.1 [Gibberella zeae PH-1], gi\|42545487\|gb\|E...	151.0	[0..30]	[174..93]
gi\|88184887, gi\|... - gi\|88184887\|gb\|EAQ92355.1\| hypothetical protein CHGG_00590 [Chaetomium globosum CBS 148.51], gi\|1161...	146.0	[0..13]	[185..73]
gi\|67904226, gi\|... - gi\|67904226\|ref\|XP_682369.1\| hypothetical protein AN9100.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	143.0	[0..17]	[185..111]
gi\|70982388, gi\|... - gi\|70982388\|ref\|XP_746722.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668443... gi\|159123036 - gi\|159123036\|gb\|EDP48156.1\| conserved hypothetical protein [Aspergillus fumigatus A1163]	115.0	[0..30]	[188..86]
gi\|119177807, gi... - gi\|90299421\|gb\|EAS29052.1\| hypothetical protein CIMG_07798 [Coccidioides immitis RS], gi\|119177807\|r...	109.0	[0..31]	[148..89]
gi\|115385324, gi... - gi\|115385324\|ref\|XP_001209209.1\| predicted protein [Aspergillus terreus NIH2624], gi\|114196901\|gb\|EA...	108.0	[0..37]	[182..106]
gi\|83774228 - gi\|83774228\|dbj\|BAE64353.1\| unnamed protein product [Aspergillus oryzae] gi\|220693960, gi... - gi\|238498902\|ref\|XP_002380686.1\| conserved hypothetical protein [Aspergillus flavus NRRL3357], gi\|22... gi\|169782046 - gi\|169782046\|ref\|XP_001825486.1\| hypothetical protein [Aspergillus oryzae RIB40]	106.0	[0..31]	[185..93]
gi\|50555275, gi\|... - gi\|50555275\|ref\|XP_505046.1\| YALI0F05742p [Yarrowia lipolytica], gi\|49650916\|emb\|CAG77853.1\| unnamed... gi\|49650916 - gi\|49650916\|emb\|CAG77853.1\| YALI0F05742p [Yarrowia lipolytica]	60.0	[0..90]	[156..57]

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Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETLVLHLK VPTERFREVL SSLKEKQNFT ASPSSQPKPQ ERPFQMKKPR APYGMGPRAM  60
   61 KRREKAEKEK LGVVNDELAE SSKPSSGAAT PTRSAPKSSA GLINSGLRAL DRSGKPCRRW 120
  121 EKKPISIRSI STIVWKLPLW IGTPDSIPNT PELPVKTTLD SVNEIAAALS THAESSPMDA 180
  181 TSPVDSMPES ATGI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	118.055517
Match:	PF08193.2
Description:	No description for PF08193.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits