YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC902.03
Organism:	Schizosaccharomyces pombe
Length:	180 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC902.03.

Description	E-value	Query Range	Subject Range
gi\|38106763, gi\|... - gi\|39975831\|ref\|XP_369306.1\| hypothetical protein MG06158.4 [Magnaporthe grisea 70-15], gb\|EAA53030....	203.0	[0..3]	[121..43]
gi\|28924202, gi\|... - gi\|32411411\|ref\|XP_326186.1\| hypothetical protein [Neurospora crassa], gi\|28924202\|gb\|EAA33357.1\| co... gi\|85108521 - gi\|85108521\|ref\|XP_962593.1\| hypothetical protein NCU06331 [Neurospora crassa OR74A]	200.0	[0..3]	[122..58]
gi\|116194732, gi... - gi\|88179877\|gb\|EAQ87345.1\| hypothetical protein CHGG_03964 [Chaetomium globosum CBS 148.51], gi\|1161...	196.0	[0..3]	[122..48]
gi\|46121261, gi\|... - gi\|46121261\|ref\|XP_385185.1\| hypothetical protein FG05009.1 [Gibberella zeae PH-1], gi\|42551267\|gb\|E...	195.0	[0..4]	[121..41]
gi\|40740326, gi\|... - gi\|67527325\|ref\|XP_661649.1\| hypothetical protein AN4045.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	184.0	[0..1]	[122..57]
gi\|169771209 - gi\|169771209\|ref\|XP_001820074.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238486262, gi... - gi\|238486262\|ref\|XP_002374369.1\| Spo7-like protein [Aspergillus flavus NRRL3357], gi\|220699248\|gb\|EE... gi\|83767933 - gi\|83767933\|dbj\|BAE58072.1\| unnamed protein product [Aspergillus oryzae]	180.0	[0..3]	[122..57]
gi\|70990584, gi\|... - gi\|70990584\|ref\|XP_750141.1\| hypothetical protein Afu1g03910 [Aspergillus fumigatus Af293], gi\|66847...	180.0	[0..3]	[122..59]
gi\|90304361, gi\|... - gi\|90304361\|gb\|EAS33992.1\| hypothetical protein CIMG_05016 [Coccidioides immitis RS], gi\|119189937\|r...	176.0	[0..3]	[122..53]
gi\|115390985, gi... - gi\|115390985\|ref\|XP_001212997.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	169.0	[0..1]	[122..52]
gi\|46434259, gi\|... - gi\|68486640\|ref\|XP_712814.1\| potential integral nuclear/ER membrane protein [Candida albicans SC5314... orf19.14174, orf... - SPO7 CGDID:CAL0005903 Assembly 19, Contig19-10257 (45337, 46881) CDS, translated using codon table 1...	166.0	[0..3]	[121..226]

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Predicted Domain #1

Region A:
Residues: [1-180]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYVPNTLS VYHNLLILEA SFRKTYLQLQ VRRQKYMAFY VSLLVWNFYF GYRVFYRISK  60
   61 YSLIDLTYKL CLLCGIVTLL LFYFSGLYRT TIVYPSRYVQ QVNKAMRFFN IRLVITPVPW 120
  121 FQVRKPLDCG VHLILSSKRF DILVIEGWEA FRSSYFASIH RKNNSIQSNE SSESPSSKQN 180
  181

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	126.920819
Match:	PF03907.4
Description:	No description for PF03907.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits