| Protein: | SPAC2C4.12c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 361 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC2C4.12c.
| Description | E-value | Query Range |
Subject Range |
|
|
281.0 | [0..10] | [237..4] |
|
|
273.0 | [0..10] | [237..4] |
|
|
272.0 | [0..7] | [237..1] |
|
|
267.0 | [0..10] | [238..4] |
|
|
258.0 | [0..32] | [227..3] |
|
|
256.0 | [0..11] | [212..3] |
|
|
255.0 | [0..9] | [218..8] |
|
|
253.0 | [0..29] | [215..8] |
|
|
251.0 | [0..31] | [237..10] |
|
|
251.0 | [0..14] | [241..12] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MNSHELIEES NNSGTPATKS SSKPTKKIRP RNDLVHYSKA LSKVLRHTAK ANGLQIREDG 60
61 YIEVDSILKL PQFRGMGMEL LLSIVKGNDK KRFTMEEVEG VLYIRANQGH SIKAVQVPMA 120
121 RIDNASSIPK VVHGTKKELW PVISKQGLSR MKRNHIHCAT GLYGDPGVIS GIRKSCTLYI 180
181 YIDSAKAMQD GVEFYRSENG VILTEGVNGL LSSKYFSRVE TSDGEVLLDA KA
|
| Detection Method: |  |
| Confidence: | 53.09691 |
| Match: | 1wfxA |
| Description: | Crystal Structure of APE0204 from Aeropyrum pernix |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [233-361] |
1 11 21 31 41 51
| | | | | |
1 SPKNNRSDES DQSDPESIDP FCDNLQALSM HELELLEEKH SNFGYSEGII KGKMQVAQSG 60
61 FDDGFKHGSR LGFQMGKTIG TLKAKLYIFE ENEQMEILKQ ELDRLQESAE FHIFVANHKE 120
121 EILKCIREK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.693 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.688 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.687 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.639 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.599 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.562 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.507 | N/A | N/A | a.118.1 | ARM repeat |
