YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC227.03c
Organism:	Schizosaccharomyces pombe
Length:	371 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC227.03c.

Description	E-value	Query Range	Subject Range
gi\|34392439 - gi\|34392439\|dbj\|BAC82547.1\| ADP/ATP carrier protein [Penicillium chrysogenum]	230.0	[0..5]	[370..20]
gi\|46098156, gi\|... - gi\|71012464\|ref\|XP_758498.1\| hypothetical protein UM02351.1 [Ustilago maydis 521], ref\|XP_399966.1\| ...	227.0	[0..6]	[370..140]
gi\|42547150, gi\|... - gi\|46137559\|ref\|XP_390471.1\| hypothetical protein FG10295.1 [Gibberella zeae PH-1], gi\|42547150\|gb\|E...	221.0	[0..3]	[370..49]
gi\|115950135 - gi\|115950135\|ref\|XP_001179092.1\| PREDICTED: similar to mitochondrial solute carrier family 25 member...	221.0	[0..10]	[370..23]
gi\|25406950, gi\|... - gi\|8954043\|gb\|AAF82217.1\|AC067971_25 Strong similarity to a mitochondrial carrier protein from Ribes...	220.0	[0..5]	[371..36]
gi\|39975761, gi\|... - gi\|39975761\|ref\|XP_369271.1\| hypothetical protein MGG_06193 [Magnaporthe grisea 70-15], gb\|EAA53065....	219.0	[0..8]	[371..83]
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	212.0	[0..4]	[277..179]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	211.0	[0..4]	[278..21]
gi\|111068502 - gi\|111068502\|gb\|EAT89622.1\| hypothetical protein SNOG_02891 [Phaeosphaeria nodorum SN15]	209.0	[0..4]	[370..29]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	207.0	[0..5]	[277..210]

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Predicted Domain #1

Region A:
Residues: [1-281]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDDSLKDAI AGGAAGLASS LVVAPLDVVK TRKQAQKAFY STGGGKNTMV LGGTLSSMRT  60
   61 IFHNEGIAGL YRGVGPMMLG YLPSWSIYFV VYEKCKVLFG VNKKYTSLHE IDSSKVGIKA 120
  121 SLDSSDKQFY RYWGGQIFSA VIAGAASVTL TNPIWVVKTR LVTQSHPRAS SFVDKIAAAT 180
  181 TVQFRNLQTD APSVKWRMPR FWLKRRTNVK SSPSQHPVNP PTGPACSPAY NNTFDAFRKI 240
  241 YKYEGLAAFY RGLFPSLFGT LHVGIQFPLY EYFKSFLDDF F

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.09691
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [282-371]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKKSNFHIVL AATLSKIAAS TVTYPHEVLR TRLQSLDAPT HNSATLLIRD IWRSEGWRKY  60
   61 YSGMATNFIR TIPASSVTFL SFEIVRKWLN

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	4.27
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits