YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBPJ4664.05
Organism:	Schizosaccharomyces pombe
Length:	163 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBPJ4664.05.

Description	E-value	Query Range	Subject Range
gi\|109457568 - gi\|109457568\|ref\|XP_214790.4\| PREDICTED: similar to androgen-induced 1 [Rattus norvegicus]	179.0	[0..13]	[163..237]
gi\|50742658 - gi\|50742658\|ref\|XP_419710.1\| PREDICTED: similar to androgen-induced 1; CGI-103 protein; androgen ind...	176.0	[0..13]	[159..371]
gi\|73946077 - gi\|73946077\|ref\|XP_854469.1\| PREDICTED: similar to androgen-induced 1 [Canis familiaris]	175.0	[0..13]	[159..210]
gi\|7022549 - gi\|7022549\|dbj\|BAA91640.1\| unnamed protein product [Homo sapiens]	174.0	[0..13]	[163..80]
AIG1_MOUSE - Androgen-induced gene 1 protein OS=Mus musculus GN=Aig1 PE=2 SV=1	174.0	[0..13]	[161..80]
gi\|38109009, gi\|... - gi\|39941642\|ref\|XP_360358.1\| hypothetical protein MG05732.4 [Magnaporthe grisea 70-15], gb\|EAA54941....	170.0	[0..3]	[162..68]
gi\|86826466, gi\|... - gi\|86826466\|gb\|AAI12810.1\| Androgen-induced 1 [Bos taurus], gi\|115496320\|ref\|NP_001069794.1\| androge...	168.0	[0..13]	[159..80]

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Predicted Domain #1

Region A:
Residues: [1-163]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVGLFSDIS GSLTLVKLKN ILLYIVCPLE TIVSILYWSI VSYDRSLLIP KDRPVPLPLN  60
   61 FDISVHLMPT VYTLIDYLFF SPPFSLSIGP SLLVYLSIAV SYMLWVEKCY QMNKFYAYPI 120
  121 LAILDPIKKT IFYTVASIIS FSCYIVLKMV HPYALPSGAP PRS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits