YRC Public Data Repository - Protein Structure Prediction

Protein:	dad1
Organism:	Schizosaccharomyces pombe
Length:	85 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dad1.

Description	E-value	Query Range	Subject Range
DAD1_ASHGO - DASH complex subunit DAD1 OS=Ashbya gossypii GN=DAD1 PE=3 SV=1 DAD1_ASHGO - DASH complex subunit DAD1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	114.0	[0..1]	[73..1]
gi\|190405009 - gi\|190405009\|gb\|EDV08276.1\| DASH complex subunit DAD1 [Saccharomyces cerevisiae RM11-1a] DAD1 - Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced... gi\|151942004 - gi\|151942004\|gb\|EDN60360.1\| duo1 and dam1 interacting protein [Saccharomyces cerevisiae YJM789] DAD1_YEAST - DASH complex subunit DAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAD1 PE=1 SV=1	111.0	[0..1]	[83..1]
gi\|42545872, gi\|... - gi\|46105394\|ref\|XP_380501.1\| hypothetical protein FG00325.1 [Gibberella zeae PH-1], gi\|42545872\|gb\|E...	92.0	[0..2]	[71..1]
gi\|18376377, gi\|... - gi\|32404100\|ref\|XP_322663.1\| predicted protein [Neurospora crassa], gi\|28917931\|gb\|EAA27616.1\| predi... gi\|85082116 - gi\|85082116\|ref\|XP_956852.1\| hypothetical protein NCU03405 [Neurospora crassa OR74A]	88.0	[0..16]	[71..17]
gi\|114192175, gi... - gi\|115399406\|ref\|XP_001215292.1\| predicted protein [Aspergillus terreus NIH2624], gi\|114192175\|gb\|EA...	85.0	[0..11]	[81..8]
DAD1_KLULA - DASH complex subunit DAD1 OS=Kluyveromyces lactis GN=DAD1 PE=3 SV=1 DAD1_KLULA - DASH complex subunit DAD1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12...	80.0	[0..8]	[75..3]
gi\|88179386, gi\|... - gi\|88179386\|gb\|EAQ86854.1\| hypothetical protein CHGG_08107 [Chaetomium globosum CBS 148.51], gi\|1161...	79.0	[0..16]	[80..16]
gi\|83773045 - gi\|83773045\|dbj\|BAE63173.1\| unnamed protein product [Aspergillus oryzae] gi\|169779683 - gi\|169779683\|ref\|XP_001824306.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238500355, gi... - gi\|238500355\|ref\|XP_002381412.1\| DASH complex subunit DAD1, putative [Aspergillus flavus NRRL3357], ...	77.0	[0..10]	[71..7]
gi\|119191756, gi... - gi\|90305270\|gb\|EAS34901.1\| predicted protein [Coccidioides immitis RS], gi\|119191756\|ref\|XP_00124648...	77.0	[0..19]	[71..12]
gi\|66850886, gi\|... - gi\|70996991\|ref\|XP_753250.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668508...	75.0	[0..7]	[80..1]

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Predicted Domain #1

Region A:
Residues: [1-85]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDITENIQNE QNKDFDDIDF ERRRRLLTLQ ISKSMNEVVN LMSALNKNLE SINGVGKEFE  60
   61 NVASLWKEFQ NSVLQKKDRE MLDAP

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	31.638272
Match:	PF08649.1
Description:	No description for PF08649.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.889	N/A	N/A	a.7.15	Description not found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits