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View Structure Prediction Details

Protein: SPAC23C4.17
Organism: Schizosaccharomyces pombe
Length: 674 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC23C4.17.

Description E-value Query
Range
Subject
Range
NSUN2 - NOP2/Sun domain family, member 2
606.0 [0..2] [673..27]
gi|114598922 - gi|114598922|ref|XP_517620.2| PREDICTED: NOL1/NOP2/Sun domain family 2 protein [Pan troglodytes]
603.0 [0..2] [673..27]
gi|74207211, gi|... - gi|74207211|dbj|BAE30795.1| unnamed protein product [Mus musculus], gi|74151867|dbj|BAE29720.1| unna...
601.0 [0..3] [673..28]
gi|109504531, gi... - gi|157822221|ref|NP_001101873.1| NOL1/NOP2/Sun domain family, member 2 [Rattus norvegicus], gi|14903...
595.0 [0..2] [673..43]
gi|74003041 - gi|74003041|ref|XP_535800.2| PREDICTED: similar to NOL1/NOP2/Sun domain family 2 protein isoform 1 [...
588.0 [0..2] [673..29]
gi|46250336 - gi|46250336|gb|AAH68818.1| LOC414460 protein [Xenopus laevis]
571.0 [0..8] [673..19]

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Predicted Domain #1
Region A:
Residues: [1-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRNKKVTQ GKRAYNDKSE IVLENKQFEG YYKKQNLFRG KPNDEFDSFM EYMRKPLPTT  60
   61 FRICGYRHHA FELKNHFEKY YVPSLKNVVH EGQTIPPPTV LPWYPDGLAY IVDAQKDVIR 120
  121 KSPPLKRLQR FLVSENEAGN INRQEAVSML PPLFLDVEPH HVILDMCAAP GSKTAQLIEA 180
  181 VYKKANIKDA AHDSKNLKSV EGLVIANDAD PKRAQMLVHQ INRLNSPNIL VVNHDASTMP 240
  241 NIYVKGSSPS DGLNVIEEKK ILKFDRILAD VPCSGDGTFR KNLSLWREWS ANSAFSLHPL 300
  301 QLRILIRGLQ LLKVGGCLVY STCSINPIEN EAVVTAALKA TGGAVSLVDV SKKLPLLKRD 360
  361 PGLLSWKVLD DSLNEFQSPA ENTNDKIELT ESMWPLPEEE MSKLHIERCA RLYPHMQNTG 420
  421 GFFVAVLQKT DPINSRSFDP KKYTASMEIL PPENKRQRTE KGVDEASNST LTKSGNSYFD 480
  481 EEPFVYINPD DTSIKTIVDF YGIDPSFPRD QFFVRNQSGI PVRSIYFACS LFKEIIEANT 540
  541 NRVKFVHGGV RFFVKQEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.09691
Match: 2frxA
Description: No description for 2frxA was found.

Predicted Domain #2
Region A:
Residues: [559-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQLLKDFSLK ANKDICNFRI HSNGVNIISP FLNEKHFYDA GLKDLKILVK NEYPHVEQFS  60
   61 ESGMLKKEFE KMPLGCNILR VDAQTKDGAL MDMLILQPIW RSPTSCNLML ARKEKQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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