YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC1039.08
Organism:	Schizosaccharomyces pombe
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1039.08.

Description	E-value	Query Range	Subject Range
gi\|15074416 - gi\|15074416\|emb\|CAC46062.1\| Probable serine acetyltransferase [Sinorhizobium meliloti 1021] gi\|15965236 - gi\|15965236\|ref\|NP_385589.1\| serine acetyltransferase protein [Sinorhizobium meliloti 1021]	245.0	[0..1]	[265..1]
gi\|113872894, gi... - gi\|150396332\|ref\|YP_001326799.1\| serine O-acetyltransferase [Sinorhizobium medicae WSM419], gi\|15002...	244.0	[0..1]	[265..1]
gi\|15888889, gi\|... - gi\|15888889\|ref\|NP_354570.1\| hypothetical protein AGR_C_2895 [Agrobacterium tumefaciens str. C58], g... gi\|25286523 - pir\|\|B97550 serine acetyltransferase (AJ271648) [imported] - Agrobacterium tumefaciens (strain C58, ...	240.0	[0..1]	[265..14]
gi\|48861074, gi\|... - gi\|90020731\|ref\|YP_526558.1\| Serine O-acetyltransferase [Saccharophagus degradans 2-40], gi\|89950331...	237.0	[0..6]	[266..11]
gi\|34101355, gi\|... - gi\|34495499\|ref\|NP_899714.1\| serine O-acetyltransferase [Chromobacterium violaceum ATCC 12472], gi\|3...	236.0	[0..8]	[265..1]
gi\|25286519 - gi\|25286519\|pir\|\|F84554 probable serine acetyltransferase [imported] - Arabidopsis thaliana	235.0	[0..14]	[268..34]
gi\|17987017, gi\|... - gi\|17987017\|ref\|NP_539651.1\| serine acetyltransferase [Brucella melitensis 16M], gi\|17982670\|gb\|AAL5... gi\|25286525 - pir\|\|AH3343 serine O-acetyltransferase (EC 2.3.1.30) [imported] - Brucella melitensis (strain 16M)	234.0	[0..10]	[265..35]
gi\|1657235, gi\|1... - pir\|\|T09140 serine O-acetyltransferase (EC 2.3.1.30) - spinach, gi\|1657235\|dbj\|BAA13635.1\| serine a...	234.0	[0..16]	[253..81]
SAT2_ORYSJ - Probable serine acetyltransferase 2 OS=Oryza sativa subsp. japonica GN=SAT2 PE=2 SV=1	234.0	[0..14]	[266..78]

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Predicted Domain #1

Region A:
Residues: [1-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVQTAERTI TLVQAIWPKL RKEAEKQCEV NPWLAKDLAR KILSKKTLRE SLSCVLALPL  60
   61 DHVTGSSESM ENWFYSILGL NDEKIIRSAM IDLDRLYTTN PACPDLISAF LSFRGFHALQ 120
  121 LYRIAHGLWS EGDKTSAVLV QNWTAVAYGV DIHPAASIGD GLFLDHALGI VIGETAIVED 180
  181 GVSIWHNVTL GSTFKDSGAR HPVIRKNAML CTGATVLGRV EVGENAVVAA GALVTKDVAP 240
  241 NRLALGSPAR DVGPVPQYFG ALTNPNCTNK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.0
Match:	1t3dA
Description:	Crystal structure of Serine Acetyltransferase from E.coli at 2.2A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
serine O-acetyltransferase activity	7.87896510108566	bayes_pls_golite062009
serine O-acyltransferase activity	7.87896510108566	bayes_pls_golite062009
O-acyltransferase activity	3.5929335433661	bayes_pls_golite062009
O-acetyltransferase activity	2.49457770952472	bayes_pls_golite062009
catalytic activity	2.22811944286398	bayes_pls_golite062009
transferase activity	1.82656452828944	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.61334532879528	bayes_pls_golite062009
acyltransferase activity	1.61097318205269	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.61041958820284	bayes_pls_golite062009
acetyltransferase activity	0.426204902618823	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: