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View Structure Prediction Details

Protein: mrpl16
Organism: Schizosaccharomyces pombe
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mrpl16.

Description E-value Query
Range		 Subject
Range
gi|109132846 - gi|109132846|ref|XP_001089131.1| PREDICTED: similar to ribosomal protein L10 [Macaca mulatta]
 210.0 [0..23] [197..56]
gi|73963593 - gi|73963593|ref|XP_547794.2| PREDICTED: similar to 60S ribosomal protein L10 (QM protein) (Tumor sup...
 207.0 [0..13] [203..14]
gi|60834521 - gi|60834521|gb|AAX37098.1| ribosomal protein L10 [synthetic construct]
 206.0 [0..25] [197..1]
gi|52345842, gi|... - gi|52345842|ref|NP_001004965.1| MGC89303 protein [Xenopus (Silurana) tropicalis], gi|49671118|gb|AAH...
 205.0 [0..25] [197..1]
RPL10 - ribosomal protein L10
gi|60654969, gi|... - gi|60654969|gb|AAX32048.1| ribosomal protein L10 [synthetic construct], gi|117645498|emb|CAL38215.1|...
 205.0 [0..25] [197..1]
RL10_PONPY - 60S ribosomal protein L10 - Pongo pygmaeus (Orangutan)
RL10_PONAB - 60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3
 205.0 [0..25] [197..1]
gi|167045820 - gi|167045820|gb|ABZ10488.1| ribosomal protein L10 (predicted) [Callithrix jacchus]
gi|226955351 - gi|226955351|gb|ACO95346.1| ribosomal protein L10 (predicted) [Dasypus novemcinctus]
RL10_PAPAN - 60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1
gi|170649634 - gi|170649634|gb|ACB21221.1| ribosomal protein L10 (predicted) [Callicebus moloch]
RPL10 - ribosomal protein L10
gi|51980562 - gb|AAH82196.1| Unknown (protein for MGC:98731) [Xenopus laevis]
RL10_MOUSE - 60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=1 SV=3
RL10_RAT - 60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3
gi|190576574 - gi|190576574|gb|ACE79064.1| 60S ribosomal protein L10 (predicted) [Sorex araneus]
tr|F7AYR2|F7AYR2... - Uncharacterized protein OS=Equus caballus OX=9796 GN=RPL10 PE=4 SV=1
gi|74008842, gi|... - gi|74008842|ref|XP_867641.1| PREDICTED: similar to ribosomal protein L10 isoform 7 [Canis familiaris...
ENSMMUT000000077... - null, null
 205.0 [0..25] [197..1]
RL10_SHEEP - 60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1
RL10_BOVIN - 60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4
RL10_PIG - 60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=1 SV=3
gi|51814392 - gi|51814392|gb|AAU09485.1| GekBS044P [Gekko japonicus]
 205.0 [0..25] [198..1]

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Predicted Domain #1
Region A:
Residues: [1-215] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQQYNKFP FFFSGILGPT RLNGLQMPPI QTMVRWGHQY APRSIRNQKA QKGRVPIPIG  60
   61 GSLRGTQLEW GEYGMRLKDR SIRFHAKQLE TAEQILKRIL KPIKAARVYT RFCCNVPVCV 120
  121 KGNETRMGKG KGAFEYWAAR IPIGRVLFEI GGDGMRKELA EHALKQAAFH LPGKYEIIVK 180
  181 QTPKRLGTTL IHETPITTET SKMNYQEITS TTTAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.522879
Match: 1p85K
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.80692012906383 bayes_pls_golite062009
structural molecule activity 9.22985932721781 bayes_pls_golite062009
peptidyltransferase activity 3.83536146028392 bayes_pls_golite062009
transferase activity, transferring amino-acyl groups 0.386783133410145 bayes_pls_golite062009
catalytic activity 0.145440139643068 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle