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View Structure Prediction Details

Protein: SPBPB2B2.14c
Organism: Schizosaccharomyces pombe
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBPB2B2.14c.

Description E-value Query
Range
Subject
Range
YI47_SCHPO - UPF0494 membrane protein C1348.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1348...
SPBC1348.07 - S. pombe specific DUF999 protein family 6
383.0 [0..1] [230..1]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRDTRNVDL EWGLELCKPE KVNKQNLFTN IIKPQKDKIN IKTDKIKFFL DNLFTEFSKF  60
   61 HDSCYPDGRI STRSKLRWPL LIIWCILIVF AIDKNFEVKD FLSIWINESF INENRFYSEI 120
  121 WGPIAIYICL FVLLLLGLI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 104.075721
Match: PF06198.2
Description: No description for PF06198.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YCSKIVVKAI PLISIVIAAV VVIIAVAMVK ILYICHWLIY KILILAFGIK VKPLGDTLPT  60
   61 HNGETGSHSK ATVGSDIEQI EFQNMPTPVK K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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