YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBP16F5.05c
Organism:	Schizosaccharomyces pombe
Length:	146 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBP16F5.05c.

Description	E-value	Query Range	Subject Range
gi\|99034481 - gi\|99034481\|ref\|ZP_01314472.1\| hypothetical protein Wendoof_01000724 [Wolbachia endosymbiont of Dros...	177.0	[0..1]	[146..178]
gi\|56698944 - gi\|56698944\|gb\|AAW23170.1\| ankyrin domain protein [Wolbachia pipientis]	175.0	[0..1]	[146..177]
gi\|115433911, gi... - gi\|115433911\|ref\|XP_001217610.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	170.0	[0..2]	[145..1002]
gi\|115621182, gi... - gi\|115951148\|ref\|XP_001197526.1\| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...	169.0	[0..2]	[145..210]
gi\|42520409, gi\|... - gi\|42520409\|ref\|NP_966324.1\| ankyrin repeat-containing protein [Wolbachia endosymbiont of Drosophila...	168.0	[0..5]	[146..116]
gi\|66826541, gi\|... - gi\|66826541\|ref\|XP_646625.1\| hypothetical protein [Dictyostelium discoideum AX4], gi\|60474523\|gb\|EAL... gi\|60474523 - gi\|60474523\|gb\|EAL72460.1\| hypothetical protein DDB0190886 [Dictyostelium discoideum]	168.0	[0..2]	[145..416]
gi\|108868779, gi... - gi\|157106769\|ref\|XP_001649474.1\| ankyrin 2,3/unc44 [Aedes aegypti], gi\|108868779\|gb\|EAT33004.1\| anky...	167.0	[0..2]	[145..151]
gi\|28274852 - gi\|28274852\|gb\|AAO25691.1\| ankyrin repeat protein E4_2 [synthetic construct]	167.0	[0..2]	[146..47]
gi\|58534919, gi\|... - gi\|58698567\|ref\|ZP_00373467.1\| ankyrin repeat domain protein [Wolbachia endosymbiont of Drosophila a...	166.0	[0..2]	[145..294]

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Predicted Domain #1

Region A:
Residues: [1-146]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDDLIYAC RAADEELLDE IIEKCPQELS RRDENGNSGL HMASANGHIA VVQKIIPYLN  60
   61 KEVINAQNES GNTAMHWAAL NGHAEICKLL LEAGGDPHIK NIYEKSPIYE ADIRNQQKVM 120
  121 DLFLDFEIAK GSEENTGDEE KLEDGI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.154902
Match:	1n0rA
Description:	4ank
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits