YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC663.13c
Organism:	Schizosaccharomyces pombe
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC663.13c.

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	119.0	[0..2]	[142..4]
gi\|18976639, gi\|... - gi\|18976639\|ref\|NP_577996.1\| ribosomal protein s18 alanine acetyltransferase [Pyrococcus furiosus DS...	119.0	[0..1]	[143..17]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	118.0	[0..1]	[143..19]
gi\|57642149, gi\|... - gi\|57642149\|ref\|YP_184627.1\| ribosomal protein-alanine acetyltransferase RimI-like protein [Thermoco...	117.0	[0..1]	[143..16]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	115.0	[0..2]	[142..3]
gi\|14590218, gi\|... - gi\|3256685\|dbj\|BAA29368.1\| 172aa long hypothetical acetyltransferase [Pyrococcus horikoshii OT3], gi... gi\|7451125 - pir\|\|A71455 probable acetyltransferase - Pyrococcus horikoshii	114.0	[0..1]	[143..19]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	110.0	[0..2]	[144..3]
gi\|19886952, gi\|... - gi\|20093987\|ref\|NP_613834.1\| acetyltransferase [Methanopyrus kandleri AV19], gi\|19886952\|gb\|AAM01764...	110.0	[0..10]	[144..40]
gi\|146295284, gi... - gi\|82500547\|ref\|ZP_00885956.1\| Ribosomal-protein-alanine acetyltransferase [Caldicellulosiruptor sac...	109.0	[0..3]	[142..6]
gi\|28493559, gi\|... - gi\|28493559\|ref\|NP_787720.1\| ribosomal protein acetyltransferase [Tropheryma whipplei str. Twist], g... gi\|28572331, gi\|... - gi\|28572331\|ref\|NP_789111.1\| hypothetical protein TW169 [Tropheryma whipplei TW08/27], gi\|28410462\|e...	108.0	[0..1]	[144..359]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIELDAINPN NLKILEVINE KCFDPEIIIF PTSFYKDTIS VGPLAQYAYF NQVCVGAVRC  60
   61 KKETHNKSHK IQILSLAVLP AYRNRSIGTK LLEYACETAA EGKAKEIYIK LSPKLDVSEW 120
  121 FIHRGFIIDE SSKTEDSVLL SKKL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.0
Match:	2ob0A
Description:	No description for 2ob0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits