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View Structure Prediction Details

Protein: SPAC1635.01
Organism: Schizosaccharomyces pombe
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1635.01.

Description E-value Query
Range
Subject
Range
gi|114619980 - gi|114619980|ref|XP_001138480.1| PREDICTED: similar to voltage dependent anion channel form 3 [Pan t...
334.0 [0..2] [282..290]
VDAC2_MOUSE - Voltage-dependent anion-selective channel protein 2 OS=Mus musculus GN=Vdac2 PE=1 SV=2
gi|53733651 - gb|AAH83965.1| Unknown (protein for MGC:98006) [Xenopus laevis]
327.0 [0..3] [282..16]
VDAC2_RAT - Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus GN=Vdac2 PE=1 SV=2
327.0 [0..3] [282..16]
ENSPTRT00000004999 - null
gi|55664663, gi|... - gi|57209203|emb|CAI40914.1| voltage-dependent anion channel 2 [Homo sapiens], gi|55664663|emb|CAH731...
327.0 [0..3] [282..30]
gi|540011 - pir||A38102 voltage-dependent anion channel-like protein - rat
gi|299036 - gi|299036|gb|AAB26053.1| B-36 VDAC=36 kda voltage dependent anion channel [rats, hippocampus, Peptid...
326.0 [0..3] [282..16]
VDAC2_PIG - Voltage-dependent anion-selective channel protein 2 OS=Sus scrofa GN=VDAC2 PE=2 SV=1
324.0 [0..3] [282..15]
VDAC2_RABIT - Voltage-dependent anion-selective channel protein 2 OS=Oryctolagus cuniculus GN=VDAC2 PE=2 SV=1
POR2_BOVIN - (P68002) Voltage-dependent anion-selective channel protein 2 (Outer mitochondrial membrane protein p...
323.0 [0..3] [282..15]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPAYAAIN KLCNDLLQRD FPVGATLLSV RTTAPNGVVF NVSGNQDAKG VISGKLETSF  60
   61 NDKANGLTIS QGWTTANVLE SKVGLSEQFA PGLHLNVNTT FSPATA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKTAILNLEH QHPLIHTHAS VNALERKFLG DFTVGHEGFL AGAEFGYDVQ KGNVSNYAAT  60
   61 IGYLASPLSV ALQASNNLSV FRASYYHRVS SDVEAGGNVT WDAASTANAI TLELASKYAL 120
  121 DKDTFVKGKI NSAGVATLSY FQTVRPGVTV GLGLQLDTQR LGQPAHKAGL SLAFSA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle