YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC1071.11
Organism:	Schizosaccharomyces pombe
Length:	244 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1071.11.

Description	E-value	Query Range	Subject Range
HPAHR_ACIBA - p-hydroxyphenylacetate 3-hydroxylase, reductase component OS=Acinetobacter baumannii GN=C1-hpah PE=1...	166.0	[0..29]	[244..6]
gi\|226945280, gi... - gi\|67153975\|ref\|ZP_00415720.1\| Flavin reductase-like [Azotobacter vinelandii AvOP], gi\|67088108\|gb\|E... gi\|67153975 - gi\|67153975\|ref\|ZP_00415720.1\| Flavin reductase-like [Azotobacter vinelandii AvOP]	161.0	[0..30]	[243..2]
gi\|95111152 - gi\|95111152\|emb\|CAK15872.1\| P-hydroxyphenylacetate hydroxylase C1:reductase component [Pseudomonas e... gi\|104782165, gi... - gi\|95111152\|emb\|CAK15872.1\| P-hydroxyphenylacetate hydroxylase C1:reductase component [Pseudomonas e...	160.0	[0..33]	[240..1]
gi\|16262882, gi\|... - gi\|16262882\|ref\|NP_435675.1\| hypothetical protein with local similarity [Sinorhizobium meliloti 1021... gi\|25505153 - pir\|\|E95315 hypothetical protein SMa0793 [imported] - Sinorhizobium meliloti (strain 1021) magaplasm...	159.0	[0..32]	[242..10]
gi\|150378190, gi... - gi\|150378190\|ref\|YP_001314785.1\| flavin reductase domain-containing protein [Sinorhizobium medicae W...	159.0	[0..32]	[242..1]
gi\|91688997, gi\|... - gi\|91785043\|ref\|YP_560249.1\| putative flavin reductase-like protein [Burkholderia xenovorans LB400],...	159.0	[0..30]	[235..2]
gi\|118645744, gi... - gi\|172061536\|ref\|YP_001809188.1\| flavin reductase domain-containing protein [Burkholderia ambifaria ... gi\|72607922, gi\|... - gi\|74019248\|ref\|ZP_00689865.1\| Flavin reductase-like [Burkholderia ambifaria AMMD], gi\|72607922\|gb\|E...	158.0	[0..30]	[235..2]
gi\|67529481, gi\|... - gi\|67549182\|ref\|ZP_00427053.1\| Flavin reductase-like [Burkholderia vietnamiensis G4], gi\|67529481\|gb...	158.0	[0..27]	[235..157]
gi\|106891467, gi... - gi\|148658405\|ref\|YP_001278610.1\| flavin reductase domain-containing protein [Roseiflexus sp. RS-1], ...	157.0	[0..35]	[232..1]
gi\|124894180, gi... - gi\|84362777\|ref\|ZP_00987391.1\| COG1853: Conserved protein/domain typically associated with flavoprot...	157.0	[0..34]	[235..6]

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Predicted Domain #1

Region A:
Residues: [1-244]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIRFTHCFT SSSSLPCYIL RHLPFSNFNR YSTASHDNVN AFRLLMRRFA QPVVIITSGF  60
   61 ADGHRAGMTA SSFTPVSLTP NPVISFNIKI PSRTANAIQQ SNRVIVHLLS SSIKKHSEWA 120
  121 SLLAKQKHQI NPLMNSEKNS TSVEDLPGSN RTQQTSSHSL LHPLHPIDVS LSKEGLPCLV 180
  181 DSLGLLHCSI IHSYQVQDHI LFVANVERVE HGSSPLESSS GLVYYNRNYC STSPLSPIID 240
  241 SFES

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.69897
Match:	1rz0A
Description:	Flavin reductase PheA2 in native state
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
oxidoreductase activity	0.15878158984798	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: