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View Structure Prediction Details

Protein: SPAC212.01c, SPB...
Organism: Schizosaccharomyces pombe
Length: 280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC212.01c, SPB....

Description E-value Query
Range
Subject
Range
SPAC750.06c - S. pombe specific DUF999 protein family 4
YLZ6_SCHPO - UPF0494 membrane protein C750.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC750....
499.0 [0..1] [280..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPESLKKQ VEPPGYNELF MVEDVCNVDL EQGLDLCKPE KVNKQSQRSR QSRQSLFTNT  60
   61 IKPQKDKMNI KTNKIKEFLN DLFTEFSKFH NSYYPDGRIS TRSNFRWPLL IIWSIIIVFA 120
  121 VDKKFEVQKF LSIWINENRF YSEIWVPIAI YVCLLVLMLL SLI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 113.886057
Match: PF06198.2
Description: No description for PF06198.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.810 N/A N/A a.46.1 Methionine synthase domain
View Download 0.473 N/A N/A a.1.1 Globin-like
View Download 0.409 N/A N/A a.1.1 Globin-like
View Download 0.388 N/A N/A a.156.1 S13-like H2TH domain
View Download 0.359 N/A N/A a.7.6 Ribosomal protein S20

Predicted Domain #2
Region A:
Residues: [164-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFAEFAVLAL RVTGVIIAVL GAVLGMIIAV LGMIIAALGM IIAALGATIT GLLYFGHWAL  60
   61 YKLVILSLGF KIVTPGDVCV SNTLPTHNGE TALHSETTVG SDIEQIELQN MPTPVKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle