| Protein: | SPBC3F6.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 827 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC3F6.04c.
| Description | E-value | Query Range |
Subject Range |
|
|
500.0 | [0..24] | [820..2] |
|
|
493.0 | [0..24] | [820..2] |
|
|
473.0 | [0..14] | [820..8] |
|
|
465.0 | [0..24] | [820..134] |
|
|
462.0 | [0..24] | [820..2] |
|
|
436.0 | [0..26] | [820..3] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MGKNGSQLKN LKSSIRQANL GTRPNNKKSR TRSTESHEDR QAKVQKIQSD FNLFDRQFTK 60
61 RKFDVGGRRV KGTEGKPGVS RGVGEELRRR TIGAELKKRN RSGAIIDRRF GENNPHLSVE 120
121 EKMLERFSRE QQRRSKRELY NLDAEDVLTH GNRPLSDIDS FEEPGFGLDE GEELNDEVVR 180
181 RMH
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [184-524] |
1 11 21 31 41 51
| | | | | |
1 FGGFEDSDAE NEKEGEGAHK SKREVMSEII AKSKHYKAER QAEKERYEDE REKLDEQMED 60
61 LQSFLSDYKK ASRKSGIKTQ RPIISDGDAR YDSFVREMVF DKRAHPTERT KTEEELAQIE 120
121 ADRLRELEDQ RISRMEHYQE DSASEAGSIE DEQATDNVFG FGKGLEQENE EEWNGINEEA 180
181 EESEDEESVN SDTSFVDDEQ LKVEEQPLVG SAIKNEGSEK ASLAYTYPCP TSHVEFVQLL 240
241 KGLDYKDYPT VVSRIRTLHH VKLHPDNKSR LENFSVILLQ HILHLTRQPM ISMELLEHLT 300
301 EHLHSLAQQF PSALGISFIS VVEGMRKRLA KSYVYPEIKF P
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [525-754] |
1 11 21 31 41 51
| | | | | |
1 EISDLLFFNL TGSIFPTSDK KHIVVSPVML TMAESLSQSP ADSLSDVCKK LYIANLFLKF 60
61 QSYSHRYVPE VITAVSQALY LLYPNFISIV PGTFALPDSL KEKQNLFAIQ DISLDEPQRL 120
121 SLYELEELPT GLLQSSILFI TLNLIEMAID IYFKEQAFIE IFVPIMDMLQ LYSLKKELLS 180
181 KRLSEKLLST LQAVSDSIES AKANRKPLAL QSHRPLGITS QVPKFEEGYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [755-827] |
1 11 21 31 41 51
| | | | | |
1 LDKSSHDIDP ERAQLNKLRA QHRDAKKGAI RTLRKDARFI ARERRQEQRA KDQAYNEKMR 60
61 KLENRLQHFD PAV
|
| Detection Method: | |
| Confidence: | 0.959 |
| Match: | 1rw6A |
| Description: | human APP core domain |
Matching Structure (courtesy of the PDB): |
|
