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View Structure Prediction Details

Protein: SPCC74.02c
Organism: Schizosaccharomyces pombe
Length: 710 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC74.02c.

Description E-value Query
Range
Subject
Range
gi|49080542, gi|... - gi|71024157|ref|XP_762308.1| hypothetical protein UM06161.1 [Ustilago maydis 521], ref|XP_403776.1| ...
596.0 [0..32] [571..237]
gi|2275316 - gi|2275316|gb|AAB63883.1| unknown [Schizosaccharomyces pombe]
121.0 [0..142] [216..1]
gi|49651048, gi|... - gi|50555540|ref|XP_505178.1| YALI0F08811p [Yarrowia lipolytica], gi|49651048|emb|CAG77985.1| YALI0F0...
gi|49651048 - gi|49651048|emb|CAG77985.1| YALI0F08811p [Yarrowia lipolytica]
68.0 [0..489] [625..618]
PP1RA_XENLA - Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Xenopus laevis GN=ppp1r10 PE=2 SV=1
67.0 [0..189] [425..7]
gi|58260520, gi|... - gi|58260520|ref|XP_567670.1| hypothetical protein CNK01910 [Cryptococcus neoformans var. neoformans ...
62.0 [0..80] [584..223]
gi|50255407, gi|... - gi|50255407|gb|EAL18142.1| hypothetical protein CNBK1630 [Cryptococcus neoformans var. neoformans B-...
58.0 [0..80] [584..223]
gi|31335119, gi|... - gi|31559809|ref|NP_853522.1| polycystic kidney disease 1 like 3 [Mus musculus], gi|31335119|gb|AAO32...
57.0 [0..5] [167..445]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNWNSVRNV SSDRQTSKTS ENPPHTSNEY SGKPEFINLS PDLEENLDEK LMSAFPGLEP  60
   61 HVFQHSQSPL SHKDASLLAT MPSVASSNPS LISSGSSQTG SPSQSLSSNK EPSSPGISPS 120
  121 NDSQSQN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNHTSISANP YVNNPSHTSR NPDSGSSLNT ASHEVPSSKS DVNVQMLARL KSKSRQKISS  60
   61 SDPLEDLRLT LTECLNPINI VQAPKECAAI LVNLMSNI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [226-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQDDQKLVFL DLLKSKVGNS IYSQLVDGGR KLFLPKLRNW FVSAIRSKHD ELIHLILLVL  60
   61 ANLPLTTEKL AEVKFGKPIL IVKKKSTNSV IRQLAENLSE LAEKSFTIEQ NRENEKSSTK 120
  121 NDSTVSSSAV VMAPAGPAMA PSASNKPSAS STTKSSNSKS KKKVTSISGT 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [396-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFFKNLASST KPTSASSSTK APLTKQQTNP STPLSSIMAG LKGREKEKDK DSGISSENVS  60
   61 NNREELPSFR KRSSSSRQSE EIASLQAENA VFSSDPASND EKTGNKKRKK KSVSWKPDND 120
  121 LVQVKFIESL NEEGA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [531-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASVKTPHIYG NARDMDRQEA RVAFGSHVED DVENEIIWYK PVPIKFEISK DEIHPRGYKC  60
   61 GGNERNLTPE ATSEIEREKN ESKDISTFNI ILDLPVIREF DDSRPPAHIK LVSSDTQATT 120
  121 ELGFNGLVQQ VSENNTNAYS ATSNSQLSSI FSNLSSSISD ASSNVLQNPS LSIPNYSNAI 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle