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View Structure Prediction Details

Protein: rhp7
Organism: Schizosaccharomyces pombe
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rhp7.

Description E-value Query
Range
Subject
Range
gi|113535187, gi... - gi|50904693|ref|XP_463835.1| putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-grou...
211.0 [0..37] [553..85]
gi|116309677, gi... - gi|125549425|gb|EAY95247.1| hypothetical protein OsI_016480 [Oryza sativa (indica cultivar-group)], ...
197.0 [0..3] [562..159]

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Predicted Domain #1
Region A:
Residues: [1-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGSRVRGP NSALTEFLRS QGINASALGR ARPPRQSEES AGQSTGTESE VIQTPTSVEE  60
   61 NNEDENSMST TTIEIPVVKR RNLRNQKKKK KTDEEAEDNE DTFSMNSRAG FSYKAREHTG 120
  121 KLDFCAHCNC RFTITPYSKY SNSEKGWLCY PCSRGAEDRS VPELRTRKRK ALTRKKVAAA 180
  181 TMDEEISVPK LQDLCIRVIA EYINDIEAFG DIGQVNMDKI SQIISKNRSL NDTTVKLFLS 240
  241 GGQTELKLYD CSKITADSLF QIAQYCPNLQ TLHLTYCGQM QDQVLHFYAD HLTELTDVSF 300
  301 QGAFLVSSSE WINFFKKRGS KLISLELTDT ARIHVSVINA IVDCCPNLIS LNLSRIFYLD 360
  361 DECVRLLAGC RNLVSLKIES PGGIINDGSI LDVLNQIGSG LHTLSLSGCT KLTDEVLKQG 420
  421 IGPCCGRLKH LNLSGLELLT DDEASIVFGE WKIQSGLETL SLRRCLSLGD KTVRAVLVNS 480
  481 GHTLRTLDLN GMSFVTDEAL QYIVNFPLPM LKALDVSWIR GMNDKLVCDF ESKKPTLEKL 540
  541 LVWGDNHVLM PSNRLLLIGR EVQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 2z63A
Description: No description for 2z63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle