YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC285.05
Organism:	Schizosaccharomyces pombe
Length:	348 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC285.05.

Description	E-value	Query Range	Subject Range
gi\|46187965, gi\|... - gi\|66047086\|ref\|YP_236927.1\| purine nucleoside permease [Pseudomonas syringae pv. syringae B728a], g...	513.0	[0..7]	[347..9]
gi\|167617025 - gi\|167617025\|ref\|ZP_02385656.1\| lipoprotein, putative [Burkholderia thailandensis Bt4] gi\|255665255, gi... - gi\|83718193\|ref\|YP_440300.1\| putative lipoprotein [Burkholderia thailandensis E264], gi\|83652018\|gb\|...	511.0	[0..5]	[347..13]
gi\|28871265, gi\|... - gi\|28871265\|ref\|NP_793884.1\| purine nucleoside permease, putative [Pseudomonas syringae pv. tomato s... tr\|Q87XQ3\|Q87XQ3... - Purine nucleoside permease, putative OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_412...	509.0	[0..7]	[347..9]
gi\|124899295, gi... - gi\|84359117\|ref\|ZP_00983874.1\| COG5042: Purine nucleoside permease [Burkholderia dolosa AUO158], gi\|...	508.0	[0..33]	[347..46]
gi\|148028196, gi... - gi\|254359009\|ref\|ZP_04975281.1\| purine nucleoside permease family protein [Burkholderia mallei 20027... gi\|126239738, gi... - gi\|126446884\|ref\|YP_001078021.1\| putative lipoprotein [Burkholderia mallei NCTC 10247], gi\|126239738... gi\|124382248, gi... - gi\|124382248\|ref\|YP_001025931.1\| putative lipoprotein [Burkholderia mallei NCTC 10229], gi\|124290268... gi\|254299460, gi... - gi\|254299460\|ref\|ZP_04966909.1\| purine nucleoside permease family protein [Burkholderia pseudomallei... gi\|167921556 - gi\|167921556\|ref\|ZP_02508647.1\| putative lipoprotein [Burkholderia pseudomallei BCC215] gi\|167905316 - gi\|167905316\|ref\|ZP_02492521.1\| putative lipoprotein [Burkholderia pseudomallei NCTC 13177] gi\|157937081, gi... - gi\|254189403\|ref\|ZP_04895913.1\| purine nucleoside permease family protein [Burkholderia pseudomallei... gi\|254176461, gi... - gi\|254176461\|ref\|ZP_04883119.1\| putative lipoprotein [Burkholderia mallei ATCC 10399], gi\|194315787\|... gi\|166999808 - gi\|166999808\|ref\|ZP_02265638.1\| putative lipoprotein [Burkholderia mallei PRL-20] gi\|254262974, gi... - gi\|254262974\|ref\|ZP_04953839.1\| purine nucleoside permease family protein [Burkholderia pseudomallei... gi\|194530467, gi... - gi\|254204891\|ref\|ZP_04911244.1\| purine nucleoside permease family protein [Burkholderia mallei JHU],... gi\|147748542, gi... - gi\|254200930\|ref\|ZP_04907295.1\| purine nucleoside permease family protein [Burkholderia mallei FMH],... gi\|134280827, gi... - gi\|134280827\|ref\|ZP_01767537.1\| purine nucleoside permease family protein [Burkholderia pseudomallei... gi\|238563524, gi... - gi\|238563524\|ref\|ZP_00438762.2\| purine nucleoside permease family protein [Burkholderia mallei GB8 h... gi\|53721323, gi\|... - gi\|53721323\|ref\|YP_110308.1\| lipoprotein [Burkholderia pseudomallei K96243], gi\|52211737\|emb\|CAH3773... gi\|52423218, gi\|... - gi\|53717248\|ref\|YP_106072.1\| putative lipoprotein [Burkholderia mallei ATCC 23344], gi\|52423218\|gb\|A...	506.0	[0..5]	[347..13]
gi\|91691911, gi\|... - gi\|91779251\|ref\|YP_554459.1\| CNT family concentrative nucleoside/H+ anitporter [Burkholderia xenovor...	503.0	[0..33]	[347..47]
gi\|78061141, gi\|... - gi\|78061141\|ref\|YP_371049.1\| purine nucleoside transporter [Burkholderia sp. 383], gi\|77969026\|gb\|AB...	503.0	[0..33]	[347..48]
gi\|71736376, gi\|... - gi\|71736376\|ref\|YP_273659.1\| purine nucleoside permease, putative [Pseudomonas syringae pv. phaseoli...	503.0	[0..7]	[347..9]
gi\|84352987, gi\|... - gi\|84352987\|ref\|ZP_00977929.1\| COG5042: Purine nucleoside permease [Burkholderia cenocepacia PC184],...	503.0	[0..33]	[347..48]
gi\|118644051, gi... - gi\|172064247\|ref\|YP_001811898.1\| purine nucleoside permease [Burkholderia ambifaria MC40-6], gi\|1719... gi\|74018578, gi\|... - gi\|74018578\|ref\|ZP_00689198.1\| Purine nucleoside permease [Burkholderia ambifaria AMMD], gi\|72608511...	503.0	[0..21]	[347..35]

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Predicted Domain #1

Region A:
Residues: [1-348]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLKLVASV LALMTIVPAQ AGLIGKRSVF KPKVMIINMF SLEANAWLSQ MDDLYANNIT  60
   61 VVGLNRLYPQ VHCNTQQTIC QMTTGEGKSN AASSIMALTL SPKFDLTETF FLISGIAGIN 120
  121 PYAASLGSVG VARFAVDIDL INSVDLRELP SYFQSSGWEI DTDPYENGSS NEIVYPESMP 180
  181 YQTNLYELNN TLITAAMEII KDVVLEDNEK AASYRKLYNE SAARRPPFIT QCDTATGDNY 240
  241 WAGTYMGDFV SNITNVLTNS TGHYCTTQQE DNASLTALTR ASFDGLVNIN RVVIMRSGSD 300
  301 FDRGAGNITA LANLLNSTGH VSSLACDNLY HAGAPLIDHI VNHWSYWT

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.985
Match:	1zosA
Description:	No description for 1zosA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits