| Protein: | SPBC4F6.12 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 438 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC4F6.12.
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..41] | [427..2489] |
|
|
323.0 | [0..38] | [436..288] |
|
|
317.0 | [0..12] | [436..267] |
|
|
313.0 | [0..41] | [424..358] |
|
|
307.0 | [0..17] | [436..395] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MHSPIPELPR FERRLTGPRA APSSPVSTNG SPLNNLVRSR LSDGALNFTG GRIATPLPQP 60
61 SLKTPESPLS KRNPTIKQNR VRFDLPDDEL SRSNVSSPEK TLLTSASTST FDSLKKELLP 120
121 ELPSLAYSDD DEFPSSPEEL NSHVNYPDVR NVYDCHTGLQ PLVDHDCIED RQKTFASKQL 180
181 PTLPLQKSSK LSNRRP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [197-353] |
1 11 21 31 41 51
| | | | | |
1 ALHSFHSAPA NSLYPLPTPT SQLPSNLSSN NLFQSDSLKP SMVSSHTSTK PVLYRGNSEK 60
61 SCHSCGGSLR AGRIISASGK KLHPQCFKCD TCSQNLEHVG FYYREGKFYC HLDYHEQFSP 120
121 RCKHCKTPIE DQAVHINNDW FHENHHFCAG CSEVFNV
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [354-438] |
1 11 21 31 41 51
| | | | | |
1 NIPCIYRDDL YWCQTCYDNK YAVKCKKCRK PILGISVKGS DGEYHSQCWT CGACNALLGD 60
61 EGYFMIENTP ICRPCKAISV KFNLD
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1ubdC |
| Description: | Ying-yang 1 (yy1, zinc finger domain) |
Matching Structure (courtesy of the PDB): |
|
