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View Structure Prediction Details

Protein: SPAC694.04c
Organism: Schizosaccharomyces pombe
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC694.04c.

Description E-value Query
Range
Subject
Range
MYG1_MOUSE - UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=1 SV=1
491.0 [0..2] [319..38]
MYG1_RAT - UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1
489.0 [0..2] [319..39]
gi|79527307 - gi|79527307|ref|NP_199012.2| unknown protein [Arabidopsis thaliana]
488.0 [0..4] [319..50]
gi|114644498 - gi|114644498|ref|XP_522402.2| PREDICTED: MYG1 protein isoform 4 [Pan troglodytes]
484.0 [0..6] [319..46]
gi|30704877, gi|... - gi|56676385|ref|NP_067653.2| MYG1 protein [Homo sapiens], gi|30704877|gb|AAH51871.1| Chromosome 12 o...
484.0 [0..6] [319..46]
gi|109096910 - gi|109096910|ref|XP_001104094.1| PREDICTED: similar to MYG1 protein isoform 3 [Macaca mulatta]
483.0 [0..6] [319..46]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLVKIATH SGTFHADEAL AVYMLRRLDR FSGAQIVRSR DPQVLDSCDI IVDVGGKYDG  60
   61 IKYFDHHQRE FNDTFSPKYS TRLSSAGLIY KHFGREVIHA VLPQLKINEQ DLETLYEKVY 120
  121 QSFVEGLDAN DNGISAYPAG LKPSFKAAMS LPEMVSSFLP AWNSEKQDDQ TYLECFQKAS 180
  181 DLMGTWFVRS VEHYALSWLP AKTLAREAIL KAKDSPILIV DQFFPWKGHL FDIEKELGIE 240
  241 NQFKYAIYSD G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [252-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAWRVQAVSI DPTSFTCRLP LPEPWRGIRD EKLSELTGIP GCIFVHASGF IGGNQTFEGA  60
   61 LEMARKALDF PQN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle