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View Structure Prediction Details

Protein: hcn1
Organism: Schizosaccharomyces pombe
Length: 80 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for hcn1.

Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRNPTAIQ ITAEDVLAYD EEKLRQTLDS ESTTEEALQK NEESTRLSPE KKKIIRERRI  60
   61 GITQIFDSSM HPSQGGAAQS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.740 a.4.5 "Winged helix" DNA-binding domain
View Download 0.736 a.4.1 Homeodomain-like
View Download 0.735 a.4.5 "Winged helix" DNA-binding domain
View Download 0.704 a.4.1 Homeodomain-like
View Download 0.624 a.4.1 Homeodomain-like
View Download 0.622 a.64.1 Saposin
View Download 0.580 a.64.1 Saposin
View Download 0.559 a.37.1 A DNA-binding domain in eukaryotic transcription factors


YRC Informatics Platform - Version 3.0
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