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View Structure Prediction Details

Protein: fta5
Organism: Schizosaccharomyces pombe
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fta5.

Description E-value Query
Range
Subject
Range
SPCC188.09c - glycoprotein
YQ39_SCHPO - Putative cell agglutination protein C188.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...
236.0 [0..10] [379..234]
gi|2130444 - gi|2130444|pir||S62519 hypothetical protein SPAC8A4.03c - fission yeast (Schizosaccharomyces pombe)
201.0 [0..188] [379..1]
ZAN_MOUSE - Zonadhesin OS=Mus musculus GN=Zan PE=1 SV=1
185.0 [0..3] [266..765]
gi|42547455, gi|... - gi|46138323|ref|XP_390852.1| hypothetical protein FG10676.1 [Gibberella zeae PH-1], gi|42547455|gb|E...
143.0 [0..3] [351..633]
gi|157767770 - gi|157767770|ref|XP_001667365.1| Hypothetical protein CBG01853 [Caenorhabditis briggsae AF16]
gi|187037626, gi... - gi|39590899|emb|CAE58679.1| Hypothetical protein CBG01853 [Caenorhabditis briggsae], gi|187037626|em...
138.0 [0..5] [275..143]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSYISLIFT LLFFTSAARS SSVSVETGSC VRYTTIYSSG SSEFTSTITP ETPSSSSSTF  60
   61 VPISTHTSSA TNTTSGQLSI SSSSSTSSEY SSSSIPITTV SSSDSFIPSS SQTISASSST 120
  121 TDNVIVSSSI SSTVSSTPVS TIYSGTSGTT FVSSSTTYQV IPTQICDGVR GLEYAVYNYD 180
  181 LPSESTFCHP SNGYTEVSTF NKPAYFGSKD LKQSAPLFTG IFSSLDDIPT YSASDYLPAY 240
  241 PPNPEGMSST SS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [253-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCKTIVYQFF FRVPATDNWS LFVKNVDDAF FGWFGDKAIS GWSNVNYDAY AHWRIGAYGM  60
   61 GTFDLGYLEQ DSFVPVRFVL ANGAYIGGFD FAFNSSSTGP VRTTSYSYTS TCDKSFLPFG 120
  121 KGNGGLDEGT ANV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle