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View Structure Prediction Details

Protein: mug183
Organism: Schizosaccharomyces pombe
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug183.

Description E-value Query
Range
Subject
Range
gi|60552474 - gi|60552474|gb|AAH91486.1| SSRP1 protein [Homo sapiens]
368.0 [0..15] [349..162]
SSRP1_CHICK - FACT complex subunit SSRP1 OS=Gallus gallus GN=SSRP1 PE=2 SV=2
367.0 [0..15] [352..162]
gi|116283314 - gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus musculus]
365.0 [0..15] [349..162]
gi|109106294 - gi|109106294|ref|XP_001103334.1| PREDICTED: similar to structure specific recognition protein 1 [Mac...
364.0 [0..15] [349..162]
SSRP1_RAT - FACT complex subunit SSRP1 OS=Rattus norvegicus GN=Ssrp1 PE=1 SV=2
358.0 [0..15] [349..162]
gi|49250826 - gi|49250826|gb|AAH74541.1| Ssrp1 protein [Xenopus (Silurana) tropicalis]
357.0 [0..15] [347..162]

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Predicted Domain #1
Region A:
Residues: [1-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLGKTKSIQ PLVHRICKYI NTLQKENESG QVKEAGSLKR KDRVQHELGQ LVYGVLNLSF  60
   61 QAPMRKKLDV YIYENGIAVT LPGEPNLIEF WLPWNEIRCA IHVPCPRKAN VQNNFVIILK 120
  121 SESSAENIVS SDNVKEPVFF TAPYPLKKLN LVEGLRSFTH CTNSWDIFRD YFEFIGTSTL 180
  181 SPSVEEFVCP NPQTGDNGTT YGVEANYKAK DGHLFFLRTG ILWGFRKPIL FIELASIQHF 240
  241 SYSNVLQRTF TVNFEAGGTI YSFDMVDQSV FRAVNDYATK HGLMDSSLAE EKAAPVPKNP 300
  301 SVSYLNEASS LENVDDMDDI DVKEPLFSDN DEDVENSDSE DGSESIGSED EE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.30103
Match: 2gclA
Description: No description for 2gclA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle