YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: lys7
Organism: Schizosaccharomyces pombe
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lys7.

Description E-value Query
Range
Subject
Range
ADPPT_MOUSE - L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Mus musculus GN=Aasdhpp...
173.0 [0..6] [244..17]
gi|12239342 - gi|12239342|gb|AAG49439.1|AF136978_1 proteinx0005 [Homo sapiens]
171.0 [0..6] [244..17]
gi|114640164 - gi|114640164|ref|XP_508734.2| PREDICTED: aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl...
170.0 [0..6] [244..270]
ADPPT_PONPY - L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase - Pongo pygmaeus (Oranguta...
ADPPT_PONAB - L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Pongo abelii GN=AASDHPP...
170.0 [0..6] [244..17]
gi|109484158 - gi|109484158|ref|XP_001070860.1| PREDICTED: similar to L-aminoadipate-semialdehyde dehydrogenase-pho...
169.0 [0..6] [244..80]

Back

Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKVYRLLI DTQEAWPFER TRIPSFKKLS DSERQQIERY YFDMDAKMAL ASILIKRHLV  60
   61 STALECSPNE VQISVTKAGR PYCQSAHCPP IIFDFNVSHY GGIVIVVGAW LPSDPSGMRP 120
  121 INIGVDIVEC KPLAFEASWM EDFMSVFTPC EWKLIKSSIS SIDVFFLLWT CKEAILKALG 180
  181 IGLSGNPLDI VVTFHKLNEL LNSEEVSLRR AATAVYSGYS WDLEIHKLIL HSSTFYVSVA 240
  241 FPQDCVIMDL NWETLNDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 2bydA
Description: Structure of aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle