| Protein: | SPAC13G7.03 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 278 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC13G7.03.
| Description | E-value | Query Range |
Subject Range |
|
|
159.0 | [0..46] | [266..97] |
|
|
149.0 | [0..13] | [273..9] |
|
|
146.0 | [0..12] | [250..15] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MAPDISKKRL PCKVLVFNLP PTLPEQVFLQ SINSFLPHVE WHRFSKGKAT VGTRSELLSF 60
61 AYLKFQSATA VQEFFRVYQG
|
| Detection Method: |  |
| Confidence: | 29.522879 |
| Match: | 1uw4A |
| Description: | The structural basis of the interaction between nonsense mediated decay factors UPF2 and UPF3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [81-278] |
1 11 21 31 41 51
| | | | | |
1 HTFIDKKNNT YRAIVTIAPY QKIPPSKVKA DSLEGSLEQD PKFQEFKVQR ESYSQTASND 60
61 DVIEKLQTST PLLQYLAEKK NAVVEKGKSK PSKKSVKAKK KLRLAEKPAS NNSKAGKSSQ 120
121 ESKKSSKAPA ESAAAVIKED KVSDRKKSKK KPKKTPVSNS TASQASENAS DKKTKEKKSS 180
181 GKQKIASKKK DQLTTDNV
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 1w9rA |
| Description: | Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
