YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC4G9.14
Organism:	Schizosaccharomyces pombe
Length:	221 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4G9.14.

Description	E-value	Query Range	Subject Range
gi\|32416286, gi\|... - gi\|32416286\|ref\|XP_328621.1\| hypothetical protein [Neurospora crassa], gi\|28924037\|gb\|EAA33195.1\| co... gi\|85107726 - gi\|85107726\|ref\|XP_962431.1\| hypothetical protein NCU07915 [Neurospora crassa OR74A]	205.0	[0..9]	[220..29]
gi\|46116304, gi\|... - gi\|46116304\|ref\|XP_384170.1\| hypothetical protein FG03994.1 [Gibberella zeae PH-1], gi\|42550619\|gb\|E...	203.0	[0..9]	[218..29]
gi\|59802852 - gi\|59802852\|gb\|AAX07641.1\| hypothetical protein [Magnaporthe grisea] gi\|39940356, gi\|... - gi\|39940356\|ref\|XP_359715.1\| conserved hypothetical protein [Magnaporthe grisea 70-15], gb\|EAA52370....	203.0	[0..9]	[220..29]
gi\|116194964, gi... - gi\|88179993\|gb\|EAQ87461.1\| hypothetical protein CHGG_04080 [Chaetomium globosum CBS 148.51], gi\|1161...	195.0	[0..9]	[220..29]
gi\|67521576, gi\|... - gi\|67521576\|ref\|XP_658851.1\| hypothetical protein AN1247.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	195.0	[0..9]	[218..28]
gi\|111064668 - gi\|111064668\|gb\|EAT85788.1\| hypothetical protein SNOG_07137 [Phaeosphaeria nodorum SN15]	192.0	[0..10]	[220..28]
gi\|238498524, gi... - gi\|238498524\|ref\|XP_002380497.1\| integral membrane protein, Mpv17/PMP22 family, putative [Aspergillu... gi\|169781718 - gi\|169781718\|ref\|XP_001825322.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83774064 - gi\|83774064\|dbj\|BAE64189.1\| unnamed protein product [Aspergillus oryzae]	191.0	[0..9]	[218..28]
gi\|115491363, gi... - gi\|115491363\|ref\|XP_001210309.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	189.0	[0..9]	[218..28]
gi\|119173813, gi... - gi\|90298081\|gb\|EAS27712.1\| hypothetical protein CIMG_10317 [Coccidioides immitis RS], gi\|119173813\|r...	184.0	[0..9]	[218..16]

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Predicted Domain #1

Region A:
Residues: [1-159]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIAKSIVIG LLICVLFFFF FVSRFNDKYE LQPLLTLGLL NASLTALSDL LAQALDSYKL  60
   61 LKFRNKRDVS LEKYGNTILL PASTSKLDVH RTIRYAAYGL CLTPIQFRWF VALSNVIQTE 120
  121 NPFIAIVLRV ALDQFIFAPL GIVFFFLFMG ITECKSYER

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [160-221]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKSYFRKHYW PTLKANYILW PAVQLFNFTF VPLVLQVIFA NAVSMVWTAY LSLKNSSPNA  60
   61 DV

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	43.102373
Match:	PF04117.3
Description:	No description for PF04117.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits