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View Structure Prediction Details

Protein: SPAC26A3.11
Organism: Schizosaccharomyces pombe
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC26A3.11.

Description E-value Query
Range
Subject
Range
NIT2_XENTR - Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1
292.0 [0..41] [312..1]
gi|47214136 - gi|47214136|emb|CAG01394.1| unnamed protein product [Tetraodon nigroviridis]
291.0 [0..40] [313..428]
NIT2_RAT - Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1
288.0 [0..41] [312..1]
NIT2 - nitrilase family, member 2
287.0 [0..41] [316..1]
NIT2B_XENLA - Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1
286.0 [0..41] [311..1]
NIT2_DANRE - Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1
286.0 [0..41] [312..1]
NIT2_BOVIN - Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1
284.0 [0..41] [311..1]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSKFFGLVQ KGTRSFFPSL NFCYTRNIMS VSASSLVPKD FRAFRIGLVQ LANTKDKSEN  60
   61 LQLARLKVLE AAKNGSNVIV LPEIFNSPYG TGYFNQYAEP IEESSPSYQA LSSMAKDTKT 120
  121 YLFGGSIPER KDGKLYNTAM VFDPSGKLIA VHRKIHLFDI DIPGGVSFRE SDSLSPGDAM 180
  181 TMVDTEYGKF GLGICYDIRF PELAMIAARN GCSVMIYPGA FNLSTGPLHW ELLARARAVD 240
  241 NEMFVACCAP ARDMNADYHS WGHSTVVDPF GKVIATTDEK PSIVYADIDP SVMSTARNSV 300
  301 PIYTQRRFDV YSEVLPALKK EE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 1f89A
Description: hypothetical protein yl85
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.64442398754697 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.35962310800332 bayes_pls_golite062009
N-carbamoylputrescine amidase activity 0.749539597459006 bayes_pls_golite062009
hydrolase activity 0.06604196264626 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle