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View Structure Prediction Details

Protein: phf2
Organism: Schizosaccharomyces pombe
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for phf2.

Description E-value Query
Range
Subject
Range
gi|74217519 - gi|74217519|dbj|BAC31528.2| unnamed protein product [Mus musculus]
243.0 [0..18] [495..50]
gi|73984729 - gi|73984729|ref|XP_861925.1| PREDICTED: similar to bromodomain and PHD finger-containing protein 1 i...
239.0 [0..6] [495..46]
gi|76648408 - gi|76648408|ref|XP_877888.1| PREDICTED: similar to bromodomain and PHD finger-containing protein 1 i...
238.0 [0..18] [495..50]
gi|109474041, gi... - gi|109474041|ref|XP_001078685.1| PREDICTED: similar to bromodomain and PHD finger-containing protein...
237.0 [0..18] [495..155]
gi|31753086, gi|... - gi|51173720|ref|NP_001003694.1| bromodomain and PHD finger-containing protein 1 isoform 1 [Homo sapi...
236.0 [0..6] [495..46]
gi|109034684 - gi|109034684|ref|XP_001094039.1| PREDICTED: similar to bromodomain and PHD finger-containing protein...
236.0 [0..6] [495..46]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNSSYYDDD GGSFEAASYP FQFDGSRRFP NDLHPTMFEG EESNQNGGSV LIDQAFQDIQ  60
   61 NPNVNSNMHL ENQFQHFHEP NKESGAFGSY KNDDVAKEIE SSKNQETDAK SEQAPFTEDA 120
  121 SSSNYAHHRS ADSQTKSALP PNVPASSSPL PPMSIAMNIA RKRSWPASLA IERDNTADAL 180
  181 FSTEDGREEQ FNLEGVKTKS GRKVHRPNHF DPLVKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [217-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTRRRGPGRR PVVALAMKCS VCQRLQSPPK NRIVFCDGCN TPFHQLCHEP YISDELLDSP  60
   61 NGEWFCDDCI RRKKQAPLVT GTTARELNLS SEEKKSYLLS LPISQLVDIL LFCEQLHPDI 120
  121 PFYSPKTSTI VQELQSKRSA FTATMNEPVT GDQYLSLNNG TESQSKTTKH STSLPSTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 2f6jA
Description: No description for 2f6jA was found.

Predicted Domain #3
Region A:
Residues: [395-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVEVDKQYME SEKIPTIDEY LQEYSNEDEI VLQVLESFPA AVSFSTITNT IQAKYSNRKI  60
   61 KNSNITRSLN RLVRKNRVLR DARGSSYELN RTFDADRPSV RPDISITGPI PIDWMLYTPH 120
  121 TEDLTENFCT YYMFDETPIV LSSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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