YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC12G12.02
Organism:	Schizosaccharomyces pombe
Length:	183 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC12G12.02.

Description	E-value	Query Range	Subject Range
gi\|2130250 - gi\|2130250\|pir\|\|S62533 hypothetical protein SPAC12G12.02 - fission yeast (Schizosaccharomyces pombe...	225.0	[0..1]	[183..1]
gi\|31711802, gi\|... - gi\|42561683\|ref\|NP_171919.3\| unknown protein [Arabidopsis thaliana], gi\|31711802\|gb\|AAP68257.1\| At1g...	164.0	[0..5]	[145..31]
EFG1P_MAGGR - rRNA-processing protein EFG1 OS=Magnaporthe grisea GN=EFG1 PE=3 SV=1 EFG1P_MAGO7 - rRNA-processing protein EFG1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=EFG...	158.0	[0..6]	[151..41]
EFG1P_NEUCR - rRNA-processing protein efg-1 OS=Neurospora crassa GN=efg-1 PE=3 SV=1 EFG1P_NEUCR - rRNA-processing protein efg1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM...	158.0	[0..3]	[152..47]
EFG1P_CANAL - rRNA-processing protein EFG1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.11461 PE=3... gi\|238882864 - gi\|238882864\|gb\|EEQ46502.1\| conserved hypothetical protein [Candida albicans WO-1] EFG1P_CANAL - rRNA-processing protein EFG1 OS=Candida albicans GN=EFG1 PE=3 SV=1	156.0	[0..6]	[154..27]
gi\|44981062 - gi\|44981062\|gb\|AAS50914.1\| ABR143Cp [Ashbya gossypii ATCC 10895] gi\|45185373, gi\|... - gi\|45185373\|ref\|NP_983090.1\| ABR143Cp [Ashbya gossypii ATCC 10895], gi\|44981062\|gb\|AAS50914.1\| ABR14...	148.0	[0..6]	[139..50]

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Predicted Domain #1

Region A:
Residues: [1-183]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKFKGPGLS VLKKKIRDNE RLLKKENLPA NIRVEHERAL LGLQEQLSMA QLEHKKQKIF  60
   61 ERYKKVRFFE RKKAERRIKQ LEKSLKDETM DDEKRKQCEK SMRKCQIDLM YIKEYPPLTK 120
  121 YVSLYAEGTS EQTEETRNRI WAEMEERFNS GRKHKIPSSG SNRVPVQEKS STGGDLEDEF 180
  181 LQR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits