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View Structure Prediction Details

Protein: prz1
Organism: Schizosaccharomyces pombe
Length: 681 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prz1.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
556.0 [0..185] [681..2388]
gi|109125970 - gi|109125970|ref|XP_001115785.1| PREDICTED: similar to zinc finger protein 665 [Macaca mulatta]
526.0 [0..194] [679..254]
gi|76678552 - gi|76678552|ref|XP_583095.2| PREDICTED: similar to Zinc finger protein 268 (Zinc finger protein HZF3...
525.0 [0..119] [681..673]
ZNF347 - zinc finger protein 347
gi|208968133 - gi|208968133|dbj|BAG73905.1| zinc finger protein 347 [synthetic construct]
520.0 [0..106] [681..252]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERQRSEEAN RRFKDLNPSS LYDNLSKPDL GGSSELHTYM NDTSLADIPL FEDTLASEVS  60
   61 SSLISNPSKN NIQHLHPNTS EPFKTSSKSD EYDSYPRTGN VPTFSFTELN DTSVSGFGSQ 120
  121 AVFENSVSPL SNPSNSPQAF DLTQGSSSTH NANDFTVNNV GSRRQSIYEF NIGIPSSNID 180
  181 SSQFLPVSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIAASEISPS SSPQLLTSFL PSGSVSNPSS PYLQGSVGAL YEADAFNFVD VMSQASGTEV  60
   61 DSERFPSVDF EDPSLLMENQ QNITGTGSFA DYLQPPSSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [289-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLGAFTNASP GESNTGIDFD TDNTNLNPSV DLLSNHSTPS FIFENSPSAE FSHQSSPYLV  60
   61 PNSGRTLNSE NARESTIRSV NSPFSEDHAD ASLTTHVFDP ISPTALSNSV LNYD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [403-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNNFSGTPQI NVVPSSPSKS QSGPSLPANP LLQTDISITY SQSASPVSGQ PAMNENSYDL  60
   61 QNANLCAPEM SPTYTARHRS NSAGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [488-681]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFDAYEPIPQ LYTHFSHSSE CLSVNQDTEL LGKIENDNSK SNDYLSVRNT RPRSRSLNSL  60
   61 VGNKSENSSS SKAKSESKSQ GNYVCTFAGC NKRFTRAYNL KSHMNTHTNY RPFQCSICKK 120
  121 SFARQHDKRR HEQLHTGIKA FACVTCNQRF ARMDALNRHY KSEVGQNCLR TATERGIQVP 180
  181 PSRKTAVAST SKQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.154902
Match: 2i13A
Description: No description for 2i13A was found.

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