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View Structure Prediction Details

Protein: SPAC22G7.10
Organism: Schizosaccharomyces pombe
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC22G7.10.

Description E-value Query
Range
Subject
Range
gi|32140872 - gi|32140872|gb|AAP69563.1| FIP1L1/PDGFRA fusion protein; rearranged-in-hypereosinophilia-platelet de...
160.0 [0..3] [162..36]
gi|187040941, gi... - gi|39580319|emb|CAE56054.1| Hypothetical protein CBG23626 [Caenorhabditis briggsae], gi|187040941|em...
154.0 [0..4] [175..20]
gi|53130760 - gi|53130760|emb|CAG31709.1| hypothetical protein [Gallus gallus]
152.0 [0..10] [202..19]
gi|26340408 - gi|26340408|dbj|BAC33867.1| unnamed protein product [Mus musculus]
151.0 [0..3] [207..35]
gi|76619857 - gi|76619857|ref|XP_879512.1| PREDICTED: similar to FIP1-like 1 isoform 6 [Bos taurus]
150.0 [0..15] [162..25]
FIP1_RAT - Pre-mRNA 3'-end-processing factor FIP1 OS=Rattus norvegicus GN=Fip1l1 PE=1 SV=1
gi|227330598 - gi|227330598|ref|NP_001153046.1| FIP1 like 1 isoform 3 [Mus musculus]
147.0 [0..3] [207..35]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNADQHMDV DEDEYLYGET IEERNDGVTV SNAKSPEQAS EESDDSDIEF IIETKPGERA  60
   61 EPLGGSIATL GSTRPSAKPQ VEKTAVEVKT TEPQDLSTAE TAPKVDIDAV PTID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKNIFEIDLE SFDDKPWRKP GADISDYFNY GFDEFTWAAY CAKQTTLRDD FSPQKFMASL  60
   61 AQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.200659
Match: PF05182.4
Description: No description for PF05182.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [177-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPGPLPSGNV PSPAEFQAMM ASGFPPFMPI PPPIGGPQED MGYSRNFPVH ASSNYNTTHT  60
   61 SGGGVHSGAA TPNAYVNNNP SSSRRESESP ANSPNITSSA GMTHAQPTHN PTSSYGNGAS 120
  121 TNYNASRPPS NHPHSSNYPS SSRRKPSPDR YSNYSSRGSG GRYRRNRY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle