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View Structure Prediction Details

Protein: tea1
Organism: Schizosaccharomyces pombe
Length: 1147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tea1.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
421.0 [0..390] [1146..1998]
gi|50757613 - gi|50757613|ref|XP_415578.1| PREDICTED: similar to myosin heavy chain [Gallus gallus]
357.0 [0..390] [1146..945]
gi|111070735 - gi|111070735|gb|EAT91855.1| hypothetical protein SNOG_00360 [Phaeosphaeria nodorum SN15]
309.0 [0..18] [1127..50]
gi|47207986 - gi|47207986|emb|CAF91457.1| unnamed protein product [Tetraodon nigroviridis]
305.0 [0..390] [1146..1141]
MYSS_CYPCA - Myosin heavy chain, fast skeletal muscle OS=Cyprinus carpio PE=2 SV=2
304.0 [0..390] [1146..995]
gi|21623523 - gi|21623523|dbj|BAC00871.1| myosin heavy chain [Oncorhynchus keta]
301.0 [0..390] [1146..996]
gi|61554815 - gi|61554815|gb|AAX46619.1| testis intracellular mediator protein [Bos taurus]
299.0 [0..16] [527..4]

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Predicted Domain #1
Region A:
Residues: [1-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLFKRNKG SAHKPTKPNF SKTSTTPSTS QLKHSHESNV KMSTSTVTEH RKKPTGSGSH  60
   61 ITASPWSKLT VRGSSNVLPR YSHASHLYAE GGQEIYIFGG VASDSQPKND LWVLNLATSQ 120
  121 FTSLRSLGET PSPRLGHASI LIGNAFIVFG GLTNHDVADR QDNSLYLLNT SSLVWQKANA 180
  181 SGARPSGRYG HTISCLGSKI CLFGGRLLDY YFNDLVCFDL NNLNTSDSRW ELASVVNDPP 240
  241 PARAGHVAFT FSDKLYIFGG TDGANFFNDL WCYHPKQSAW SKVETFGVAP NPRAGHAASV 300
  301 VEGILYVFGG RASDGTFLND LYAFRLSSKH WYKLSDLPFT PSPRSSHTLS CS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.39794
Match: 2dyhA
Description: No description for 2dyhA was found.

Predicted Domain #2
Region A:
Residues: [353-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLTLVLIGGK QGKGASDSNV YMLDTSRFRL GSVPTTSGRQ RNTSFFSNST GNTNPSAFNG  60
   61 LLTSSRIPSY NGSKVRSTSH PSRQQYIGSS NSRFNTRHQT ISTPVSGRAS NDLPSPVVPT 120
  121 RSNSSSILQP SYNLNSHSSD RRNTNDDDQS SLNSQQLSNQ AKAQGEVSPT LSFVPSSHSM 180
  181 EQGNGSVASA NNAQSEAATR SINSISEVSE VRFPEQSSVK TVDERKSLDG RITSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2f2uA
Description: No description for 2f2uA was found.

Predicted Domain #3
Region A:
Residues: [588-784]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLETLVEKYS ELSKQQIVEW FKSKLYEILR DSASKIDSLT EKLKVANAEK NAALCEAALE  60
   61 KVPLAKHNKL SDGTFSTPDK ENVQSTNDAH IMQENFSLHK ALEVMRETSS DLDKQLKDAT 120
  121 ASQKELIVQT SSFQKELVEE RERHNAISKR LQEIESLYRD RELLVTNLED QLVDQTVTIN 180
  181 KFAFERDQFR ERSMGFE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [785-1147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTIKDLTRKM EATDMLNVSL HESLRSVQTE NSELVTEMAL LKAELVKKQA IIDANANIYD  60
   61 KLTADHTNYE TVSADINQNL KETLDKLLNG SSDFKNNEIE LLHDQIRITN AKLEKREKLI 120
  121 NASKYIEDTL RSEIQEAAEK VSNLEFSNFN LKEENSNMQL QLMKALEQRN TGAKQLVNLR 180
  181 MQLSTATSEL DMLKLKLRTT ALALEESPDD YSDILSILRA DMSPFHDLHK QCGVLIDTLN 240
  241 GVKRGFGIFE KKFTDYHKFL ENISDKLKSE EDTSLETPIH ENQSIQSDQI KEVGEVLSAI 300
  301 KSLSDSVMLL KNQIDDLAKE KLPLSSSDDE KVNIKEKTDF MKLLVKSGLS NPPAKEPVHD 360
  361 NEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle