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View Structure Prediction Details

Protein: SPCC970.06
Organism: Schizosaccharomyces pombe
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC970.06.

Description E-value Query
Range
Subject
Range
gi|145013229, gi... - gi|39959108|ref|XP_364464.1| hypothetical protein MGG_09309 [Magnaporthe grisea 70-15], gb|EAA55502....
363.0 [0..1] [302..1]
gi|85113270 - gi|85113270|ref|XP_964496.1| hypothetical protein NCU03319 [Neurospora crassa OR74A]
gi|32420623, gi|... - gi|32420623|ref|XP_330755.1| hypothetical protein [Neurospora crassa], gi|28926280|gb|EAA35260.1| hy...
356.0 [0..1] [302..12]
gi|169781458 - gi|169781458|ref|XP_001825192.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|238498238, gi... - gi|238498238|ref|XP_002380354.1| COPII-coated vesicle protein SurF4/Erv29, putative [Aspergillus fla...
gi|83773934 - gi|83773934|dbj|BAE64059.1| unnamed protein product [Aspergillus oryzae]
355.0 [0..1] [302..12]
gi|115491671, gi... - gi|115491671|ref|XP_001210463.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
354.0 [0..1] [302..12]
gi|66850178, gi|... - gi|70995576|ref|XP_752543.1| COPII-coated vesicle protein SurF4/Erv29 [Aspergillus fumigatus Af293],...
gi|159131298 - gi|159131298|gb|EDP56411.1| COPII-coated vesicle protein SurF4/Erv29, putative [Aspergillus fumigatu...
354.0 [0..1] [302..12]
gi|41581252 - gi|41581252|emb|CAE47901.1| surfeit locus protein 4 homologue, putative [Aspergillus fumigatus]
348.0 [0..1] [302..12]
gi|42545731, gi|... - gi|46107310|ref|XP_380714.1| hypothetical protein FG00538.1 [Gibberella zeae PH-1], gi|42545731|gb|E...
348.0 [0..8] [302..13]
gi|111064282, gi... - gi|169607389|ref|XP_001797114.1| hypothetical protein SNOG_06751 [Phaeosphaeria nodorum SN15], gi|11...
346.0 [0..8] [302..13]
gi|71019269, gi|... - gi|71019269|ref|XP_759865.1| hypothetical protein UM03718.1 [Ustilago maydis 521], ref|XP_401333.1| ...
345.0 [0..2] [301..32]
gi|119184381, gi... - gi|90301896|gb|EAS31527.1| hypothetical protein CIMG_07006 [Coccidioides immitis RS], gi|119184381|r...
gi|240109864 - gi|240109864|gb|EER28033.1| SURF4 family protein [Coccidioides posadasii C735 delta SOWgp]
344.0 [0..1] [302..12]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRSPFSTI PLSMNQDSYQ TRTTVGIRKK TFSERACQFM EQAETFMAPF TPYMPLLGRF  60
   61 LIVATYFEDA IRIVTQWPEQ VSYMRDYRRF RFGTAPLLLF VCVVLMLVGS TLVVFKKRQA 120
  121 YAIGSLLFVT LLQAFAYGLI TSGEMFFRNM SVIGGLCLVA SDTFIHRRIN RFAGLPAVSE 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HNKRTYFQLA GRVLLIFMFL GLLAKEGSGI SWTRILVHIL SVTACAMVVI GFKAKFFAAV  60
   61 LVLILSVANF IINSFWSVPR ESPYRDFYRY DFFQTLSIVG GLLYLVNTGP GKFSVDEKKK 120
  121 IY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle