| Protein: | sec8 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1088 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec8.
| Description | E-value | Query Range |
Subject Range |
|
|
1034.0 | [0..1] | [1073..21] |
|
|
1012.0 | [0..5] | [1083..33] |
|
|
998.0 | [0..6] | [1073..65] |
|
|
956.0 | [0..78] | [1050..33] |
|
|
946.0 | [0..78] | [1050..31] |
|
|
941.0 | [0..12] | [1073..681] |
|
|
939.0 | [0..78] | [1050..31] |
|
|
939.0 | [0..78] | [1050..31] |
|
Region A: Residues: [1-443] |
1 11 21 31 41 51
| | | | | |
1 MDTRGYSETK KGRYPVGKKS LESPNGYSNY GTSMDNELSS EYASRGMHIG DLENLVNEIE 60
61 DEWKDLGRED YQPISTALEL LDDSSFGRDY KSFLNVYDRI SAALQTIAHT HKDDFTRGIS 120
121 AYGEIMEGIQ KCNSRIIALK QSLEASQECI GNTNSKELQQ TLARSSQYKK VISVLKELNE 180
181 ANQLFDNFHT LVDSKQYYHA SDLIRRVWDE LSRSDFDGIL VVEQFKSRMT GLLSHLEDIL 240
241 SEELVSITFL KDAVAYPIVS YCSPNPLRET SNPYFLRDFL KNNANTSTLG QSEQLRYLEE 300
301 ALSLKLSDCL KMDYGRDSLR DIRIVLESLN LLGKLPNAIS SLKSRTSAEM FTTVDSTSRA 360
361 IVNKYSLGNN VSTVNPFSKS LYDIGLHAET DREHTMISEF LTNLFTKLRC VLMHYRGISE 420
421 FMTKLETKTP KHASSSHKSS IMS
|
| Detection Method: |  |
| Confidence: | 1.03 |
| Match: | 2bsgA |
| Description: | The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [444-606] |
1 11 21 31 41 51
| | | | | |
1 VNSDPTSPKV SKFDTSDSTF PFDTLLQAFE SEIRLMLKDY LISKEEYIEN SGNFVVGTEM 60
61 SIYNLPGENE EDKLFDVTNE IAVENKSNAF YARINELVNE KAPELILNKS NASVSTIELF 120
121 SGSSKEIVRL AGHVVFVGPS VFHASSVLPQ TVFFLEDSVS ILK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.459 | 0.829 | barrier septum formation | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
|
Region A: Residues: [607-665] |
1 11 21 31 41 51
| | | | | |
1 NPNIPPQFAV NFMKEFLRGS YIPQLYKFMS SHFDTIMKDV GAFQLHRDWK IYSKIPIFK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [666-755] |
1 11 21 31 41 51
| | | | | |
1 CHVAIVQYFH DLQDYLPIVA LNLVEFYELL HTLLVRFRNH CSDYLSDLCR TAVLKEYKHV 60
61 NEDTEDVDDT VRVKLLHDDV TYPQFIKFLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [756-827] |
1 11 21 31 41 51
| | | | | |
1 QKNPSLEGLN ELCRMENKRL LQYEDRAITS EVKLPVSVLS KDSDLVNSVS YLHNSMEWFL 60
61 QRCFSRFMNG SR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [828-1088] |
1 11 21 31 41 51
| | | | | |
1 RMNVLQQNQA NFGGDFLPID NLLGNNSDLM KGYVTVCIEL YTDFYKSAYK EVFDSLQRLQ 60
61 FDALLLIRME VRLQYIHSIN QSVNLPDYVV EYRGRPDASI MALNSTIVTT NLKLETCLNE 120
121 WERRFVFQGL SELVDSSLYS IFYKIESMNR GSCLQMLKNM SAMIQILKTV KEIHGDVEFP 180
181 KSSRVFGIYQ NGAKKIIEHF IAAPKKELLP DVKQMVRIYY QRLMKDAKRN GRDDLYRQYQ 240
241 KKIGSVLTQF DNTVGGARKN P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
