Protein: | sec6 |
Organism: | Schizosaccharomyces pombe |
Length: | 730 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec6.
Description | E-value | Query Range |
Subject Range |
|
613.0 | [0..9] | [725..22] |
|
612.0 | [0..9] | [725..11] |
|
612.0 | [0..9] | [725..11] |
|
607.0 | [0..9] | [725..36] |
|
606.0 | [0..9] | [725..11] |
|
598.0 | [0..9] | [725..21] |
|
582.0 | [0..9] | [725..11] |
Region A: Residues: [1-265] |
1 11 21 31 41 51 | | | | | | 1 MTAAASDDAV YNKVADILRQ CEDFHRLSTH IERFEREQAS LNMHVKTELE KHVEAVEMLT 60 61 LCESAREMVD EFPLISRMSR IYKNCYATKQ MISQLNNLVK ETDVIEDMLR EDLELDSDMP 120 121 NLLRAHYKLS KLREFREEAL YQASLEGQSD LPITLENSFS NLNTLSDNFD RLVLNFCRNI 180 181 FQLVKSGHIK TIVQIFKIVE AEESSDEVLK SIRDAKSSLP DSQDGPFLSL QGMTRQLRNF 240 241 RLRVLEEFQG AAAENFQRAW VSYLE |
Detection Method: | |
Confidence: | 27.69897 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [266-336] |
1 11 21 31 41 51 | | | | | | 1 DGSGELNLDF IFEDLKVAFY VLPDLTPPSY NIAKTFASIY QECLVGLVTK AVSLDTPAAV 60 61 YLYLINFHRE Y |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [337-730] |
1 11 21 31 41 51 | | | | | | 1 RKFFEENAPF SVDEVEPGLE DGKDGILVRE YTRLFTQKIR EWSDKLFQSS VDTFMKRESE 60 61 PELDSDGNYG LQGTIIFFQM ITQQINIISH TNNSDVVGIV LSSIMYIMQS MQDQWKSVMR 120 121 SELSQQLSGN PESVPPGLME YLLAVANDNL KCAGFMDNTL LNTFELITSE REEDLREAFG 180 181 KTVDGYILIS DIGVSQIVAI ISNDVKPALT SLFQPNWYQS SNMKLIVDTF RDYIVDCIEH 240 241 MVPGLFDVFL LEASNALTIS YLRSIFNKNA CFDGDNAIQQ IRSDIALAIR VFGEYMAAEH 300 301 LRSTFEPIEK LLLGMLDADV ETVSEYFHLL KEAYWDAPLS LVEAVLQNRT DLEKSIIKKM 360 361 IDIVRHENDS LQIDTSQQPT VFSQVTSLSG SSIL |
Detection Method: | |
Confidence: | 85.30103 |
Match: | 2fji1 |
Description: | No description for 2fji1 was found. |