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View Structure Prediction Details

Protein: sap1
Organism: Schizosaccharomyces pombe
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sap1.

Description E-value Query
Range
Subject
Range
gi|1362236 - gi|1362236|pir||A56214 switch-activating protein Sap1 - fission yeast (Schizosaccharomyces pombe)
454.0 [0..1] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAPKMELKS YKRKNASLSP SSSPAKAQRT HLSLEEKIKL MRLVVRHKHE LVDRKTSEFY  60
   61 AKIARIGYED EGLAIHTESA CRNQIISIMR VYEQRLAHRQ PGMKTTPEED ELDQLCDEWK 120
  121 ARLSELQQYR EKFLVGKRKC DCNDEINERL KKLTEEQQNV DMLVAKVNFL SKHLHDNEEK 180
  181 LMQVNAKMDE VLAENKRLQQ LLDHNDLLSK LEPPSAYAPH GVNMGTNMGA NMGANMNAIR 240
  241 GGLHSSISPN LGDH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle