| Protein: | prp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 906 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prp1.
| Description | E-value | Query Range |
Subject Range |
|
|
429.0 | [0..2] | [906..11] |
|
|
427.0 | [0..2] | [906..11] |
|
|
423.0 | [0..1] | [901..11] |
|
|
422.0 | [0..1] | [901..33] |
|
|
421.0 | [0..1] | [904..9] |
|
|
420.0 | [0..1] | [901..60] |
|
|
420.0 | [0..2] | [906..11] |
|
|
420.0 | [0..1] | [901..1] |
|
|
419.0 | [0..1] | [901..1] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MANFYPDFLN MQPPPNYVAG LGRGATGFTT RSDLGPAQEL PSQESIKAAI EQRKSEIEEE 60
61 EDIDPRYQDP DNEVALFATA PYDHEDEEAD KIYQSVEEHL SKRRKSQREK QEQLQKEKYE 120
121 KENPKVSSQF ADLKRGLSTL TDEDWNNIPE PGDLTRKKRT KQPR
|
| Detection Method: |  |
| Confidence: | 91.920819 |
| Match: | PF06424.3 |
| Description: | No description for PF06424.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-227] |
1 11 21 31 41 51
| | | | | |
1 RERFYATSDF VLASARNENQ AISNFAVDTQ AGTETPDMNG TKTNFVEIGA ARDKVLGIKL 60
61 AQA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [228-726] |
1 11 21 31 41 51
| | | | | |
1 SSNLTSPSTI DPKGYLTSLN SMVPKNANDL GDIRKARKLL QSVIETNPKH ASGWVAAARL 60
61 EEVANKLSQA QSLILKGCEN CSRSEDVWLE AIRLHPAAEA KVIIANAVKK LPKSVTLWLE 120
121 AEKLENQAQH KKRIIKKALE FNPTSVSLWK EAVNLEEEVD NARILLARAV ELIPMSIDLW 180
181 LALARLETYE NAKKVLNKAR QTIRTSHEVW IAAARLEEQQ GNVSRVEKIM ARGVSELQAT 240
241 GGMLQRDQWL SEAEKCETEG AVITAQAIIN TCLGVGLDEE DQFDTWLDDA QSFIARKCID 300
301 CARAVFAFSL RVYPKSEKLW LRAVELEKLY GTTESVCSIL EKAVESCPKA EILWLLYAKE 360
361 RKNVNDIAGA RNILGRAFEY NSNSEEIWLA AVRIEFVNNE NERARKLLAR ARIESGTERI 420
421 WTKSISLERI LDEKDRALQL LENALKIYPH YDKLYMMKGQ IFEDKEQIEL ARDAYLAGTK 480
481 VCPYSIPLWL LLAKLEEKQ
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [727-906] |
1 11 21 31 41 51
| | | | | |
1 SVIRARVVFD RAKVKNPKNE FLWLELIKME LRAGNISQVR AALAKALQEC PSSGLLWTEA 60
61 IWLEPRAQRK TRATDALRKC EGNAHLLCTI ARMLWLEKKA DKARSWFLKA VKADQDNGDV 120
121 WCWFYKYSLE AGNEDQQKEV LTSFETADPH HGYFWPSITK DIKNSRKTPQ ELLHLAINVL 180
181
|
| Detection Method: | |
| Confidence: | 51.69897 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
