YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAPYUG7.05
Organism:	Schizosaccharomyces pombe
Length:	282 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAPYUG7.05.

Description	E-value	Query Range	Subject Range
gi\|167532035, gi... - gi\|167631737\|ref\|ZP_02390064.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0442], g... gi\|167514661, gi... - gi\|167637154\|ref\|ZP_02395434.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0193], g... gi\|170671266, gi... - gi\|170685006\|ref\|ZP_02876231.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0465], g... gi\|170705216, gi... - gi\|170705216\|ref\|ZP_02895681.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0389], g... gi\|177649865, gi... - gi\|177649865\|ref\|ZP_02932866.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0174], g... gi\|49185927, gi\|... - gi\|49185927\|ref\|YP_029179.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Sterne], gi\|... gi\|47503581, gi\|... - gi\|47528433\|ref\|YP_019782.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. 'Ames Ancest... gi\|30263087, gi\|... - gi\|30263087\|ref\|NP_845464.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Ames], gi\|30... gi\|254760978 - gi\|254760978\|ref\|ZP_05213002.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Australia... gi\|254752460 - gi\|254752460\|ref\|ZP_05204496.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Vollum] gi\|21401019, gi\|... - gi\|65320395\|ref\|ZP_00393354.1\| COG0345: Pyrroline-5-carboxylate reductase [Bacillus anthracis str. A... gi\|254742684 - gi\|254742684\|ref\|ZP_05200369.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Kruger B] gi\|254738146 - gi\|254738146\|ref\|ZP_05195849.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Western N... gi\|254685679 - gi\|254685679\|ref\|ZP_05149538.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. CNEVA-906... gi\|229600273, gi... - gi\|229600273\|ref\|YP_002867357.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0248], ...	220.0	[0..2]	[282..3]
gi\|218541204, gi... - gi\|218898056\|ref\|YP_002446467.1\| pyrroline-5-carboxylate reductase [Bacillus cereus G9842], gi\|21854... gi\|228858122, gi... - gi\|228901519\|ref\|ZP_04065702.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 4222],... gi\|228908746, gi... - gi\|228908746\|ref\|ZP_04072580.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 200], ... gi\|75764862, gi\|... - gi\|75764862\|ref\|ZP_00744228.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar isr...	219.0	[0..2]	[281..3]
gi\|42782087, gi\|... - gi\|42782087\|ref\|NP_979334.1\| pyrroline-5-carboxylate reductase [Bacillus cereus ATCC 10987], gi\|4273...	219.0	[0..2]	[281..3]
gi\|89159827, gi\|... - gi\|89210565\|ref\|ZP_01188953.1\| Delta 1-pyrroline-5-carboxylate reductase [Halothermothrix orenii H 1...	219.0	[0..3]	[282..2]
gi\|133736321, gi... - gi\|254932690\|ref\|ZP_05266049.1\| pyrroline-5-carboxylate reductase [Listeria monocytogenes HPB2262], ... gi\|47020208, gi\|... - gi\|47091531\|ref\|ZP_00229328.1\| pyrroline-5-carboxylate reductase [Listeria monocytogenes str. 4b H78... gi\|46906627, gi\|... - gi\|46906627\|ref\|YP_013016.1\| pyrroline-5-carboxylate reductase [Listeria monocytogenes str. 4b F2365...	217.0	[0..1]	[280..1]
gi\|67849921, gi\|... - gi\|67916119\|ref\|ZP_00509840.1\| Delta 1-pyrroline-5-carboxylate reductase [Clostridium thermocellum A... gi\|196251994, gi... - gi\|196251994\|ref\|ZP_03150658.1\| pyrroline-5-carboxylate reductase [Clostridium thermocellum DSM 4150...	217.0	[0..3]	[282..4]
gi\|28204459, gi\|... - gi\|28212016\|ref\|NP_782960.1\| pyrroline-5-carboxylate reductase [Clostridium tetani E88], gi\|28204459...	217.0	[0..2]	[282..3]
gi\|110683434, gi... - gi\|110802933\|ref\|YP_699882.1\| pyrroline-5-carboxylate reductase [Clostridium perfringens SM101], gi\|...	216.0	[0..2]	[270..3]
gi\|18146299, gi\|... - gi\|18311615\|ref\|NP_563549.1\| pyrroline-5-carboxylate reductase [Clostridium perfringens str. 13], gi... gi\|110674424, gi... - gi\|110799777\|ref\|YP_697323.1\| pyrroline-5-carboxylate reductase [Clostridium perfringens ATCC 13124]... gi\|170710442, gi... - gi\|170710442\|gb\|EDT22624.1\| pyrroline-5-carboxylate reductase [Clostridium perfringens B str. ATCC 3...	216.0	[0..2]	[270..3]

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Predicted Domain #1

Region A:
Residues: [1-282]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFCVLGCG TMGKALLTGI FDSIAENGND VSDEIIIPNK FYACVKFPKE KEDVQKLFGD  60
   61 RVKVVMGAKE NAEMAAISNV LLLSCKPQAA EDVLNSPKMK EALKGKLILS ILAGKTISSL 120
  121 QSMLDESTRV IRIMPNTASR IRESMSVICP GPNATEEDIK FAEWVFNGIG RSMKLPEKLI 180
  181 DAATAVCGSG PAFVATMIEA MTDGGVMMGI PFPQAQELAA QTMVGTGRMV LQGQHPAMIR 240
  241 NDVSTPAGCT ISGLLALEDG KIRSTIARGI EQATKTASGL GK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	48.522879
Match:	2izzA
Description:	No description for 2izzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits