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View Structure Prediction Details

Protein: gpi17
Organism: Schizosaccharomyces pombe
Length: 554 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gpi17.

Description E-value Query
Range
Subject
Range
gi|22330899, gi|... - gi|22330899|ref|NP_187374.2| GPI transamidase component PIG-S-related [Arabidopsis thaliana], gi|221...
549.0 [0..73] [542..35]
gi|171680763 - gi|171680763|ref|XP_001905326.1| unnamed protein product [Podospora anserina]
gi|170940009, gi... - gi|27764276|emb|CAD60556.1| unnamed protein product [Podospora anserina], gi|170940009|emb|CAP65235....
541.0 [0..52] [535..19]
gi|32410815, gi|... - gi|32410815|ref|XP_325888.1| hypothetical protein [Neurospora crassa], gi|28921068|gb|EAA30387.1| co...
gi|85093080 - gi|85093080|ref|XP_959623.1| hypothetical protein NCU06033 [Neurospora crassa OR74A]
536.0 [0..52] [543..35]
gi|38111769, gi|... - gi|39946504|ref|XP_362789.1| hypothetical protein MGG_08259 [Magnaporthe grisea 70-15], gb|EAA57290....
533.0 [0..36] [548..6]
gi|109113740 - gi|109113740|ref|XP_001107517.1| PREDICTED: similar to phosphatidylinositol glycan class S isoform 3...
522.0 [0..64] [543..1]
gi|114668500 - gi|114668500|ref|XP_001145534.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis, class S...
522.0 [0..64] [543..1]
gi|37183341, gi|... - gi|37183341|gb|AAQ89470.1| PIGS [Homo sapiens], gi|119571484|gb|EAW51099.1| phosphatidylinositol gly...
521.0 [0..64] [543..1]
PIGS_RAT - GPI transamidase component PIG-S OS=Rattus norvegicus GN=Pigs PE=2 SV=3
520.0 [0..67] [543..12]
gi|116200700, gi... - gi|88175609|gb|EAQ83077.1| hypothetical protein CHGG_10895 [Chaetomium globosum CBS 148.51], gi|1162...
520.0 [0..70] [552..51]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPCKWLTMF LKGCWGKIAN MNHLDSCFPL RYIIGRKKAS KLLCTMDSGL KSDSHEVERS  60
   61 NFQLNKPEKS LKRYALLSFY VIILLAIPVW WKTTHYERSS LPFEDMENAP STVQTHLRFS 120
  121 PTFRILDDKG NNLTKEVQKV LEAEPQIYSY NLKVLEDDPV DYRIVLREST DLQWFWDENN 180
  181 FIIDTPSKGP SELAI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [196-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIVNCLWEAF SPQVMEVWSK FTRFSSTVEP SRAETKRTVQ FSPQYRVLLS LLVGEGNHEP  60
   61 INWDIENAIQ KYFNPLIEQL ASLAKLNIET QIQYFVEDAE AYIKDDKFCT KHADLPNLVN 120
  121 NFEKYLSFSP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.842 d.323.1 Description not found.
View Download 0.588 a.1.1 Globin-like
View Download 0.570 c.108.1 HAD-like
View Download 0.565 d.80.1 Tautomerase/MIF
View Download 0.537 d.58.51 Description not found.
View Download 0.514 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.513 d.58.21 Molybdenum cofactor biosynthesis protein C, MoaC
View Download 0.508 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain

Predicted Domain #3
Region A:
Residues: [326-554]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HIREPTIHFV LYVPSPQIQP LWLENEDSNI IPTNSMLLPQ WGSITTINFN VTEKKLLHDV  60
   61 DLKDYFRVIS RDLLLLLGIN DVPVSSLSAT LADRLLRQRI AESCIEASDT LQNLAKLVHS 120
  121 MQSMAVPKEI QMYVKDTLLS LDMAYKALSQ NNLNEALSYS NNAFSKSQEA LFHPSMVTTI 180
  181 YFPDESKYGI YAPLFAPILI PLLISFIKEV KDMLRERKLH RVANVPKPN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle