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View Structure Prediction Details

Protein: rlc1
Organism: Schizosaccharomyces pombe
Length: 184 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rlc1.

Description E-value Query
Range
Subject
Range
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
174.0 [0..39] [180..512]
gi|94471603 - gi|94471603|gb|ABF21069.1| mitochondrial calcium sensor cameleon 4mtD3cpv [synthetic construct]
167.0 [0..30] [180..354]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSKENSLG AKRAPFSSNT TSSQRVAAQA AKRASSGAFA QLTSSQIQEL KEAFALLDKD  60
   61 GDGNIGREDV KTMLTSLNQD ASEDSINHMF ESINPPINLA AFLTAMGSML CRISPRNDLL 120
  121 EAFSTFDDTQ SGKIPISTMR DALSSMGDRM DPQEVESILR SYTSHGVFYY EKFVDAIAGS 180
  181 KDSN

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Detection Method: PSI-BLAST
Confidence: 33.154902
Match: 2f2oA
Description: Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle