| Protein: | med7 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 376 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for med7.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..176] | [374..1] |
|
|
178.0 | [0..209] | [316..60] |
|
|
173.0 | [0..209] | [316..60] |
|
|
172.0 | [0..209] | [356..60] |
|
|
171.0 | [0..224] | [376..164] |
|
|
166.0 | [0..209] | [317..60] |
|
|
166.0 | [0..209] | [316..24] |
|
|
164.0 | [0..209] | [314..62] |
|
|
162.0 | [0..163] | [362..15] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MEPNEGVQLF SAFPPPPPYY KLFTRENIEK VISNMEKEAK HEDDANTLQP KTEEEIESLA 60
61 KLFKKPSCLT SGTYQMFGDT WRLDEAIPSL KEFGIPELYK DIKDGE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.550 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.505 | N/A | N/A | b.88.1 | Mss4-like |
| View | Download | 0.285 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.277 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.273 | N/A | N/A | d.58.56 | Description not found. |
| View | Download | 0.271 | N/A | N/A | a.2.17 | Description not found. |
| View | Download | 0.251 | N/A | N/A | d.58.56 | Description not found. |
| View | Download | 0.225 | N/A | N/A | g.36.1 | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain |
| View | Download | 0.207 | N/A | N/A | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.200 | N/A | N/A | d.95.2 | Homing endonucleases |
|
Region A: Residues: [107-201] |
1 11 21 31 41 51
| | | | | |
1 DEIEVVEYDP KSNAIVGTSF TRVHDYDKNS PIENEKILED DQHTAMKEKD NESDKTMKDV 60
61 EEKTEPSLKK EEEDIQMKEP LDSQDTGAVS ASSVN
|
| Detection Method: | |
| Confidence: | 4.13 |
| Match: | 1ykeA |
| Description: | Structure of the mediator MED7/MED21 subcomplex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [202-376] |
1 11 21 31 41 51
| | | | | |
1 EGFRADQKSK DGETSDLIKI PRRAYELRFL SRSLMLNFLE LLGIMAKAPE QFPSKVENIR 60
61 VLLLNLHHLI NDYRPHQSRE SLIMLLEKQL KHEESQVELL RTHNRQMTET LEKYKSLDFN 120
121 MEKEGDVIQQ LKSSIKKPLS GAEDEQKSRS MFSKNDEKLK KSLELMEDVI KRDLS
|
| Detection Method: | |
| Confidence: | 26.221849 |
| Match: | 1ykeA |
| Description: | Structure of the mediator MED7/MED21 subcomplex |
| Matching Structure (courtesy of the PDB): |
|
