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View Structure Prediction Details

Protein: exo70
Organism: Schizosaccharomyces pombe
Length: 615 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exo70.

Description E-value Query
Range
Subject
Range
gi|113565891, gi... - gi|50929789|ref|XP_474422.1| OSJNBa0088H09.18 [Oryza sativa (japonica cultivar-group)], gi|32488717|...
gi|218195860 - gi|218195860|gb|EEC78287.1| hypothetical protein OsI_17996 [Oryza sativa Indica Group]
603.0 [0..13] [614..8]
E70A1_ARATH - Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
599.0 [0..1] [614..1]
gi|125550296, gi... - gi|90399171|emb|CAJ86037.1| H0723C07.3 [Oryza sativa (indica cultivar-group)], gi|125550296|gb|EAY96...
563.0 [0..13] [614..8]

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Predicted Domain #1
Region A:
Residues: [1-615]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGIFDDNK AGFETFQKNL NSVAKNVSDA SNILLSMDKR LSGLEASAGI LRDDVTNYNR  60
   61 VSSNIYDTLK EMESLQVIHS HLPVLQKGLQ ECQNLNKSVS QNLKSVMDIL KSLAEDYTSL 120
  121 EGSPLQFASK SQQKVEMMLS EGCQILGALC YNILETYAAS SLNKASTLLD LSIPWSFPNE 180
  181 SLQQFIGLIQ QFDADVLFPV SCSSDISNIY IKIKGECVVK LLHAVSMRTD EIKLNEGSVN 240
  241 FVTGKEDVSI NLVALSRLLP AVASELLLLF DQVTAKALYP KIVKPAINTV TNATRQLEGV 300
  301 YEKRGAAENF VLLSLIDCIV VTRQNMNNLM PFEDASFLGF VNGVGREMEK ILISSISRLY 360
  361 NGTCHNNKTV PLTTDRVSEM THGIMSFLNE LAEHENASYL LESIGNWGWR HEINADLSPA 420
  421 RSVQDITRNY VMDCMDSYLT SVQTAAQAVD TIGWKMGVML LNISVYFEAK CLESKIASFL 480
  481 QDVDLEKLGD RSQKYSTMYM EVWRQCSQNM LDSTYTKSQN KSTMSAKERE ITKEKFRNFN 540
  541 EQVTSVVQVH RESVRFETGV ATFLLQEVKK TVLPLYQRFY DKYINSDFTK NKDKYIKFTK 600
  601 ADLDSFITSA FAPSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle