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View Structure Prediction Details

Protein: etd1
Organism: Schizosaccharomyces pombe
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for etd1.

Description E-value Query
Range
Subject
Range
gi|3980324, gi|1... - gi|3980324|emb|CAA10357.1| etd1 [Schizosaccharomyces pombe], pir||T43652 hypothetical protein etd1 -...
760.0 [0..1] [391..1]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVVYGSQQN LSEYFYSSVN MAEVPDTFEE NRGHSFEGVT LQRRHVKGMK SYGSDITPRR  60
   61 PKQLGLPKEV NTSECIDQGS WRKPSAFESL RSYSRKFSKR IFSFIGVESK STVQRNASGA 120
  121 DSTSLSHFTA NEINKGNCKK TALSNEFNSA NKG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKASGVGAEL PSVNGFIEGE LHDDNETDSF RINELAKQIQ ETSLGATTQE DESSDGICWD  60
   61 ELSTTS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [220-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PESSKVSEPI IQDNTQTTHI NNDSSDIRFS SRCDLFADDA DSDWEQDFNV KFDSPLIIPE  60
   61 TVNSAGHTVR EQLFEVKEFT RSIKDLKDLY EKANSKDIYD KDSEILGEAK AILRLADPAN 120
  121 YSDLKDEDAQ NILSKYKVKL EGDSSLDFDA SMLPGLNDHV HYLMSQLQLL LH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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