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View Structure Prediction Details

Protein: cia1
Organism: Schizosaccharomyces pombe
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cia1.

Description E-value Query
Range		 Subject
Range
ASF1B_XENTR - Histone chaperone asf1b OS=Xenopus tropicalis GN=asf1b PE=2 SV=1
 265.0 [0..1] [177..1]
AS1AB_XENLA - Histone chaperone asf1a-B OS=Xenopus laevis GN=asf1ab PE=2 SV=1
 265.0 [0..1] [177..1]
AS1BA_DANRE - Histone chaperone asf1b-A OS=Danio rerio GN=asf1ba PE=2 SV=1
 264.0 [0..1] [177..1]
gi|62897721 - gi|62897721|dbj|BAD96800.1| ASF1 anti-silencing function 1 homolog B variant [Homo sapiens]
 262.0 [0..1] [176..1]
gi|57101878 - gi|57101878|ref|XP_542021.1| PREDICTED: similar to anti-silencing function 1B [Canis familiaris]
 261.0 [0..1] [172..1]
gi|109123682 - gi|109123682|ref|XP_001111289.1| PREDICTED: similar to anti-silencing function 1B [Macaca mulatta]
 261.0 [0..1] [172..1]
gi|55249890 - gb|AAH86067.1| Unknown (protein for MGC:98427) [Xenopus laevis]
ASF1B_MOUSE - Histone chaperone ASF1B OS=Mus musculus GN=Asf1b PE=1 SV=1
 260.0 [0..1] [175..1]

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Predicted Domain #1
Region A:
Residues: [1-161] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVNILSVN VLNNPAKFSD PYKFEITFEC LEPLKSDLEW KLTYVGSATS QSYDQILDTL  60
   61 LVGPIPIGIN KFVFEADPPN IDLLPQLSDV LGVTVILLSC AYEDNEFVRV GYYVNNEMEG 120
  121 LNLQEMDDAE IKKVKVDISK VWRSILAEKP RVTRFNIQWD N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.522879
Match: 2dzeA
Description: No description for 2dzeA was found.

Predicted Domain #2
Region A:
Residues: [162-262] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDFDDAPPVQ PDADEEEEEE EADEMEEEFD EEGEGDEEEE EEDDGDGDGE GDGDGEGEND  60
   61 GKGSEEEEEE EIDIEEEEEE SALANASAAE EKPEEKPETS Q

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.985
Match: 2d57A
Description: Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle