YRC Public Data Repository - Protein Structure Prediction

Protein:	cdc14
Organism:	Schizosaccharomyces pombe
Length:	240 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdc14.

Description	E-value	Query Range	Subject Range
gi\|42820720 - gi\|42820720\|emb\|CAF32033.1\| cell division control protein cdc14, putative [Aspergillus fumigatus]	309.0	[0..1]	[233..1]
gi\|70995864, gi\|... - gi\|70995864\|ref\|XP_752687.1\| cell division control protein 14 [Aspergillus fumigatus Af293], gi\|6685... gi\|159131441 - gi\|159131441\|gb\|EDP56554.1\| cell division control protein 14 [Aspergillus fumigatus A1163]	304.0	[0..1]	[233..1]
gi\|114197459, gi... - gi\|115491943\|ref\|XP_001210599.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	302.0	[0..1]	[233..1]
gi\|85099933 - gi\|85099933\|ref\|XP_960869.1\| hypothetical protein NCU06636 [Neurospora crassa OR74A] gi\|28922399, gi\|... - gi\|32412884\|ref\|XP_326922.1\| hypothetical protein [Neurospora crassa], gi\|28922399\|gb\|EAA31633.1\| hy...	302.0	[0..1]	[233..1]
gi\|90300837, gi\|... - gi\|90300837\|gb\|EAS30468.1\| hypothetical protein CIMG_05947 [Coccidioides immitis RS], gi\|119181723\|r...	299.0	[0..1]	[233..23]
gi\|38102233, gi\|... - gi\|39974193\|ref\|XP_368487.1\| hypothetical protein MGG_00757 [Magnaporthe grisea 70-15], gb\|EAA49099....	289.0	[0..1]	[233..1]
gi\|49085322, gi\|... - gi\|67516747\|ref\|XP_658259.1\| hypothetical protein AN0655.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	287.0	[0..1]	[233..1]
gi\|42545483, gi\|... - gi\|46137169\|ref\|XP_390276.1\| hypothetical protein FG10100.1 [Gibberella zeae PH-1], gi\|42545483\|gb\|E...	283.0	[0..1]	[233..1]
gi\|116179886, gi... - gi\|88184868\|gb\|EAQ92336.1\| hypothetical protein CHGG_00571 [Chaetomium globosum CBS 148.51], gi\|1161...	275.0	[0..1]	[204..1]
gi\|169614313, gi... - gi\|169614313\|ref\|XP_001800573.1\| hypothetical protein SNOG_10294 [Phaeosphaeria nodorum SN15], gi\|11...	225.0	[0..1]	[232..1]

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Predicted Domain #1

Region A:
Residues: [1-240]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDLLNNAKQ HLCMRNPKLI RIGLRQVESI VYHVAKPSHD DKIPREIFLK LQDSPLYNST  60
   61 TPCIYALDSL LEYQQNEEAY EKNFQFIQKL IDDLLHVIEG LVLIHPKSQT LFEDKATLRL 120
  121 FIHLLQPSQP SMLQVAAMKT LVCIMADRPL AIRLFEQING LQQICVVFKH KQTSQDTRFQ 180
  181 ILEFFYFYLS PEPYSIDVIA YRKTRTEKQA YLSKYLSNVQ GLRDDLDKFQ PFGKLDETFD 240
  241

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits