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View Structure Prediction Details

Protein: byr3
Organism: Schizosaccharomyces pombe
Length: 179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for byr3.

Description E-value Query
Range
Subject
Range
gi|37496491 - gi|37496491|emb|CAD48448.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus 1]
167.0 [0..2] [154..326]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESESVPTVP QTTRPGPRCY NCGENGHQAR ECTKGSICYN CNQTGHKASE CTEPQQEKTC  60
   61 YACGTAGHLV RDCPSSPNPR QGAECYKCGR VGHIARDCRT NGQQSGGRFG GHRSNMNCYA 120
  121 CGSYGHQARD CTMGVKCYSC GKIGHRSFEC QQASDGQLCY KCNQPGHIAV NCTSPVIEA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.13
Match: 1oahA
Description: Cytochrome c nitrite reductase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle